RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ZNF552Q9H707 407 aaPredicted RBP4.01□□□□□ -1.77
ITGB5-213ENST00000608945 DZANK1Q9NVP4 752 aa4.01□□□□□ -1.77
ITGB5-213ENST00000608945 PPP1R9AQ9ULJ8 1098 aa4.01□□□□□ -1.77
ITGB5-213ENST00000608945 HPXP02790 462 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 TRHRP34981 398 aaPredicted RBP4□□□□□ -1.77
ITGB5-213ENST00000608945 CLCN7P51798 805 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 TTC6Q86TZ1 520 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 FERMT3Q86UX7 667 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 PCMTD1Q96MG8 357 aaPredicted RBP4□□□□□ -1.77
ITGB5-213ENST00000608945 SP110Q9HB58 689 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 GOPCQ9HD26 462 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 IRAK3Q9Y616 596 aa4□□□□□ -1.77
ITGB5-213ENST00000608945 UBAP1LF5GYI3 381 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 UBXN11Q5T124 520 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 USP51Q70EK9 711 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 NPAS4Q8IUM7 802 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 TOP6BLQ8N6T0 577 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 MYO19Q96H55 970 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 SNRKQ9NRH2 765 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 KANSL3Q9P2N6 904 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 LRFN2Q9ULH4 789 aa3.99□□□□□ -1.77
ITGB5-213ENST00000608945 ITGB3P05106 788 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 MAOBP27338 520 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 TTC39BQ5VTQ0 682 aaPredicted RBP3.98□□□□□ -1.77
ITGB5-213ENST00000608945 LINC01356Q8N9X3 169 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 SH3RF3Q8TEJ3 882 aaPredicted RBP3.98□□□□□ -1.77
ITGB5-213ENST00000608945 BSNDQ8WZ55 320 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 C8orf49Q96NF6 230 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 ZNF747Q9BV97 191 aa3.98□□□□□ -1.77
ITGB5-213ENST00000608945 DNAJC25-GNG10A0A024R161 153 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 ECEL1O95672 775 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 IL12RB1P42701 662 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 EPHB3P54753 998 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 NANOS3P60323 173 aaKnown RBP3.97□□□□□ -1.77
ITGB5-213ENST00000608945 RALGPS1Q5JS13 557 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 TRIM50Q86XT4 487 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 VOPP1Q96AW1 172 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 CCDC120Q96HB5 630 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 RBM15Q96T37 977 aaKnown RBP eCLIP3.97□□□□□ -1.77
ITGB5-213ENST00000608945 DNAJC25Q9H1X3 360 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 SLAMF8Q9P0V8 285 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 SALL4Q9UJQ4 1053 aa3.97□□□□□ -1.77
ITGB5-213ENST00000608945 IGF2BP3O00425 579 aaKnown RBP eCLIP3.96□□□□□ -1.78
ITGB5-213ENST00000608945 SCUBE1Q8IWY4 988 aa3.96□□□□□ -1.78
ITGB5-213ENST00000608945 SIX5Q8N196 739 aa3.96□□□□□ -1.78
ITGB5-213ENST00000608945 RAD18Q9NS91 495 aa3.96□□□□□ -1.78
ITGB5-213ENST00000608945 MBD1Q9UIS9 605 aaPredicted RBP3.96□□□□□ -1.78
ITGB5-213ENST00000608945 USP17L5A8MUK1 530 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 TMEFF1Q8IYR6 380 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 TMEM102Q8N9M5 508 aaPredicted RBP3.95□□□□□ -1.78
ITGB5-213ENST00000608945 BANK1Q8NDB2 785 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 WDR18Q9BV38 432 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 SLC6A17Q9H1V8 727 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 ABI2Q9NYB9 513 aaPredicted RBP3.95□□□□□ -1.78
ITGB5-213ENST00000608945 HS3ST3A1Q9Y663 406 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 LTBP3Q9NS15 1303 aa3.95□□□□□ -1.78
ITGB5-213ENST00000608945 TMPRSS2O15393 492 aa3.94□□□□□ -1.78
ITGB5-213ENST00000608945 AOC2O75106 756 aa3.94□□□□□ -1.78
ITGB5-213ENST00000608945 LGR5O75473 907 aa3.94□□□□□ -1.78
ITGB5-213ENST00000608945 NXPE3Q969Y0 559 aa3.94□□□□□ -1.78
ITGB5-213ENST00000608945 APBB1O00213 710 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 IRS4O14654 1257 aaPredicted RBP3.93□□□□□ -1.78
ITGB5-213ENST00000608945 ITGB6P18564 788 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 ATP1A2P50993 1020 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 HK2P52789 917 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 TIGD5Q53EQ6 642 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 SMYD4Q8IYR2 804 aaPredicted RBP3.93□□□□□ -1.78
ITGB5-213ENST00000608945 INTS4Q96HW7 963 aaKnown RBP3.93□□□□□ -1.78
ITGB5-213ENST00000608945 HSPA12BQ96MM6 686 aa3.93□□□□□ -1.78
ITGB5-213ENST00000608945 IGFBP4P22692 258 aa3.92□□□□□ -1.78
ITGB5-213ENST00000608945 CDSNQ15517 529 aa3.92□□□□□ -1.78
ITGB5-213ENST00000608945 ETFBKMTQ8IXQ9 262 aa3.92□□□□□ -1.78
ITGB5-213ENST00000608945 LARGE2Q8N3Y3 721 aa3.92□□□□□ -1.78
ITGB5-213ENST00000608945 VPS11Q9H270 941 aa3.92□□□□□ -1.78
ITGB5-213ENST00000608945 POU4F3Q15319 338 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 FAM129CQ86XR2 697 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 OGFOD1Q8N543 542 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 TTC9BQ8N6N2 239 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 NFATC2IPQ8NCF5 419 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 C19orf44Q9H6X5 657 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 TMEM59LQ9UK28 342 aa3.91□□□□□ -1.78
ITGB5-213ENST00000608945 PALM3A6NDB9 673 aaPredicted RBP3.9□□□□□ -1.79
ITGB5-213ENST00000608945 KCNC1P48547 511 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 SLURP1P55000 103 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 FAM26DQ5JW98 314 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 CNKSR3Q6P9H4 555 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 FANCD2OSQ96PS1 177 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 PRM3Q9NNZ6 103 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 CNTN3Q9P232 1028 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 GTF2IRD1Q9UHL9 959 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 DUSP10Q9Y6W6 482 aa3.9□□□□□ -1.79
ITGB5-213ENST00000608945 TGFB2P61812 414 aa3.89□□□□□ -1.79
ITGB5-213ENST00000608945 ZNF764Q96H86 408 aaPredicted RBP3.89□□□□□ -1.79
ITGB5-213ENST00000608945 ZNF594Q96JF6 807 aaPredicted RBP3.89□□□□□ -1.79
ITGB5-213ENST00000608945 TRIM56Q9BRZ2 755 aaKnown RBP3.89□□□□□ -1.79
ITGB5-213ENST00000608945 PIDD1Q9HB75 910 aa3.89□□□□□ -1.79
ITGB5-213ENST00000608945 SYNGAP1Q96PV0 1343 aa3.89□□□□□ -1.79
ITGB5-213ENST00000608945 FBLN1P23142 703 aa3.88□□□□□ -1.79
ITGB5-213ENST00000608945 HP1BP3Q5SSJ5 553 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms