RNA–Protein interactions for RNA: ENST00000604754.1

ZSWIM8-222, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 1 (best)

Gene ZSWIM8, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-222ENST00000604754 SSRP1Q08945 709 aaKnown RBP13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 TRIM22Q8IYM9 498 aa13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 ZNF274Q96GC6 653 aaPredicted RBP13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 KRT23Q9C075 422 aa13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 TNKSO95271 1327 aa13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
ZSWIM8-222ENST00000604754 DDR1Q08345 913 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 CLEC17AQ6ZS10 378 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 DBNDD1Q9H9R9 158 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 TCHHQ07283 1943 aa13.21□□□□□ -0.3
ZSWIM8-222ENST00000604754 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 PROM2Q8N271 834 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 PDILTQ8N807 584 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 RBM17Q96I25 401 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 CPVLQ9H3G5 476 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 KINO60870 393 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 MAP3K11Q16584 847 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZSCAN29Q8IWY8 852 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 SH3RF3Q8TEJ3 882 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 RNF41Q9H4P4 317 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 PARP3Q9Y6F1 533 aa13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
ZSWIM8-222ENST00000604754 SLURP2P0DP57 97 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 RXRBP28702 533 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 CACNB3P54284 484 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 RESTQ13127 1097 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 SAFBQ15424 915 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 PGBD1Q96JS3 809 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 NUP98P52948 1817 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 GNAT2P19087 354 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 CHRNA5P30532 468 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 TCP10Q12799 353 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 KRT40Q6A162 431 aa13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
ZSWIM8-222ENST00000604754 BTBD18B2RXH4 712 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 GOLGA8HP0CJ92 632 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 TM4SF1P30408 202 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF445P59923 1031 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 TFAP4Q01664 338 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 DNTTIP2Q5QJE6 756 aaKnown RBP13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF654Q8IZM8 581 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 XDHP47989 1333 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 USP17L3A6NCW0 530 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 USP17L4A6NCW7 530 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 KIF28PB7ZC32 967 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 CDKL5O76039 1030 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 NR5A1Q13285 461 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 USP17L1Q7RTZ2 530 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
ZSWIM8-222ENST00000604754 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 IGDCC4Q8TDY8 1250 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 PDGFDQ9GZP0 370 aaPredicted RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 SLC3A2P08195 630 aaKnown RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 FBXO18Q8NFZ0 1043 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 TMEM87BQ96K49 555 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 ZNF512BQ96KM6 892 aaPredicted RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
ZSWIM8-222ENST00000604754 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms