RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 RSRC1Q96IZ7 334 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SCYL1Q96KG9 808 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SCLT1Q96NL6 688 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 DHX36Q9H2U1 1008 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 KNDC1Q76NI1 1749 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 DISP3Q9P2K9 1392 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 ANKRD18BA2A2Z9 1011 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 HNRNPH2P55795 449 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 USP4Q13107 963 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 MICALL2Q8IY33 904 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SAMD14Q8IZD0 417 aaPredicted RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 DIAPH3Q9NSV4 1193 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 ARHGEF12Q9NZN5 1544 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SMC2O95347 1197 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 PPP2R1AP30153 589 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 STIP1P31948 543 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 GCKP35557 465 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 ETFBP38117 255 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 CLCN2P51788 898 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 NFE2L2Q16236 605 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 SHQ1Q6PI26 577 aaKnown RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 NEK10Q6ZWH5 1172 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 LMNTD2Q8IXW0 634 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 IPCEF1Q8WWN9 437 aaPredicted RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 PPP1R9BQ96SB3 815 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 C12orf49Q9H741 205 aa8.17□□□□□ -1.1
TUBE1-207ENST00000604689 CXXC1Q9P0U4 656 aaPredicted RBP8.17□□□□□ -1.1
TUBE1-207ENST00000604689 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 CTSHP09668 335 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 VDRP11473 427 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 ATF4P18848 351 aaPredicted RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 NOLC1Q14978 699 aaKnown RBP eCLIP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 ARHGEF25Q86VW2 580 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 CKAP2LQ8IYA6 745 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 USP33Q8TEY7 942 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 HNRNPLLQ8WVV9 542 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 PRPF3O43395 683 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 KRT18P05783 430 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 PYGLP06737 847 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 GUCY1B3Q02153 619 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 EHHADHQ08426 723 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 ADCY2Q08462 1091 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 PAK2Q13177 524 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 COBLL1Q53SF7 1204 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 BRDTQ58F21 947 aaPredicted RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 PHACTR1Q9C0D0 580 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 DDX41Q9UJV9 622 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 POLR1AO95602 1720 aaPredicted RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 NEO1Q92859 1461 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 FKBP5Q13451 457 aaPredicted RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 CEP57L1Q8IYX8 460 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 DHRS1Q96LJ7 313 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 IWS1Q96ST2 819 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 CAPS2Q9BXY5 557 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 SPATA7Q9P0W8 599 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 NSFL1CQ9UNZ2 370 aaKnown RBP8.16□□□□□ -1.1
TUBE1-207ENST00000604689 RABGAP1Q9Y3P9 1069 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 PCDHGA4Q9Y5G9 962 aa8.16□□□□□ -1.1
TUBE1-207ENST00000604689 CAMSAP1Q5T5Y3 1602 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 GPR182O15218 404 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 ZNF132P52740 706 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 PDCD2Q16342 344 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 TBC1D22AQ8WUA7 517 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 SYAP1Q96A49 352 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 BLMP54132 1417 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 BICDL2A1A5D9 508 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 BIN1O00499 593 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 ALDH1L1O75891 902 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 FAM163BP0C2L3 166 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 KBTBD12Q3ZCT8 623 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 AKT1S1Q96B36 256 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 POLR3CQ9BUI4 534 aaPredicted RBP8.15□□□□□ -1.1
TUBE1-207ENST00000604689 TRIM55Q9BYV6 548 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
TUBE1-207ENST00000604689 RCCD1A6NED2 376 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 H0Y3Z8 333 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 TUFMP49411 452 aaKnown RBP8.15□□□□□ -1.11
TUBE1-207ENST00000604689 SNX16P57768 344 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 SNX1Q13596 522 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC89Q8N998 374 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 RMDN2Q96LZ7 410 aa8.15□□□□□ -1.11
TUBE1-207ENST00000604689 XPO4Q9C0E2 1151 aaKnown RBP8.15□□□□□ -1.11
TUBE1-207ENST00000604689 PRDM15P57071 1507 aaPredicted RBP8.15□□□□□ -1.11
TUBE1-207ENST00000604689 EIF3AQ14152 1382 aaKnown RBP8.14□□□□□ -1.11
TUBE1-207ENST00000604689 SYCE3A1L190 88 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 TREHO43280 583 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 NUCB2P80303 420 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 ZSCAN23Q3MJ62 389 aa8.14□□□□□ -1.11
TUBE1-207ENST00000604689 CCDC93Q567U6 631 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms