RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 FAM98CQ17RN3 349 aaKnown RBP13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CYP2D7A0A087X1C5 515 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 LIFRP42702 1097 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SPECC1Q5M775 1068 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 NACAP1Q9BZK3 213 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 C4AP0C0L4 1744 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 GOLGB1Q14789 3259 aaKnown RBP13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CMA1P23946 247 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SHC4Q6S5L8 630 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CELF1Q92879 486 aaKnown RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 LRP5O75197 1615 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 DDX60Q8IY21 1712 aaKnown RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 KLRK1P26718 216 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 GTF2E1P29083 439 aaPredicted RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 DYNLL1P63167 89 aaKnown RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 TRIM29Q14134 588 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 WTAPQ15007 396 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 PTPAQ15257 358 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 ZRSR1Q15695 479 aaKnown RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 ANKRD18AQ8IVF6 992 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 C16orf45Q96MC5 204 aaPredicted RBP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 KRT23Q9C075 422 aa13.66□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 PRDM1O75626 825 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 EVX2Q03828 476 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 PPARAQ07869 468 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SARM1Q6SZW1 724 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CDC5LQ99459 802 aaKnown RBP13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 CNNM2Q9H8M5 875 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 EP400Q96L91 3159 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 SYKP43405 635 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 FAM182BQ5T319 152 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
HMGN3-AS1-201ENST00000604516 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 RTN1Q16799 776 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 MINPP1Q9UNW1 487 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 JAG2Q9Y219 1238 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 ZNF652Q9Y2D9 606 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 FMNL1O95466 1100 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 GNAT2P19087 354 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 NR5A1Q13285 461 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 LRRC8AQ8IWT6 810 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 ZNF384Q8TF68 577 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 MRFAP1L1Q96HT8 127 aa13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 IFNAR1P17181 557 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 GRIN1Q05586 938 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 PNOCQ13519 176 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 PRIMPOLQ96LW4 560 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 ERICH2A1L162 156 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 SART3Q15020 963 aaKnown RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 DIS3L2Q8IYB7 885 aaKnown RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 TFCP2L1Q9NZI6 479 aa13.63□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 USP27XA6NNY8 438 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 FOXN1O15353 648 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 CDC25BP30305 580 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 NBPF11Q86T75 865 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 NOSTRINQ8IVI9 506 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 ZNF654Q8IZM8 581 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 RIOK1Q9BRS2 568 aaKnown RBP13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 ZNF804BA4D1E1 1349 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 LMOD1P29536 600 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
HMGN3-AS1-201ENST00000604516 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms