RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 ERICH2A1L162 156 aa17.58■□□□□ 0.4
CCDC12-211ENST00000604367 CDKL5O76039 1030 aa17.58■□□□□ 0.4
CCDC12-211ENST00000604367 DDR1Q08345 913 aa17.58■□□□□ 0.4
CCDC12-211ENST00000604367 ZNF396Q96N95 335 aaPredicted RBP17.58■□□□□ 0.4
CCDC12-211ENST00000604367 PPP1R9BQ96SB3 815 aa17.58■□□□□ 0.4
CCDC12-211ENST00000604367 LEMD3Q9Y2U8 911 aa17.58■□□□□ 0.4
CCDC12-211ENST00000604367 PRDM1O75626 825 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 DZIP1Q86YF9 867 aaKnown RBP17.57■□□□□ 0.4
CCDC12-211ENST00000604367 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 FAM217BQ9NTX9 383 aaPredicted RBP17.57■□□□□ 0.4
CCDC12-211ENST00000604367 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
CCDC12-211ENST00000604367 UBE2Q2LH0YL09 131 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 NR1I2O75469 434 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 GPSM2P81274 684 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 UBAC1Q9BSL1 405 aa17.57■□□□□ 0.4
CCDC12-211ENST00000604367 MYH15Q9Y2K3 1946 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 USP17L12C9JPN9 530 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 USP17L21D6R901 530 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 IARSP41252 1262 aaKnown RBP17.56■□□□□ 0.4
CCDC12-211ENST00000604367 EVX2Q03828 476 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 NTRK3Q16288 839 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 CRY2Q49AN0 593 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 ESR2Q92731 530 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 RCOR1Q9UKL0 485 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
CCDC12-211ENST00000604367 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 ANAPC4Q9UJX5 808 aa17.56■□□□□ 0.4
CCDC12-211ENST00000604367 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 CKAP2LQ8IYA6 745 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
CCDC12-211ENST00000604367 CCDC82Q8N4S0 544 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 SLC26A6Q9BXS9 759 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 RRAGDQ9NQL2 400 aaPredicted RBP17.55■□□□□ 0.4
CCDC12-211ENST00000604367 UFL1O94874 794 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 ME1P48163 572 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
CCDC12-211ENST00000604367 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
CCDC12-211ENST00000604367 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
CCDC12-211ENST00000604367 TNKSO95271 1327 aa17.54■□□□□ 0.4
CCDC12-211ENST00000604367 POLRMTO00411 1230 aaKnown RBP17.54■□□□□ 0.4
CCDC12-211ENST00000604367 MAP3K11Q16584 847 aa17.54■□□□□ 0.4
CCDC12-211ENST00000604367 ZNF804AQ7Z570 1209 aa17.54■□□□□ 0.4
CCDC12-211ENST00000604367 FUCA2Q9BTY2 467 aa17.54■□□□□ 0.4
CCDC12-211ENST00000604367 DCP1AQ9NPI6 582 aaPredicted RBP17.54■□□□□ 0.4
CCDC12-211ENST00000604367 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 GRIK5Q16478 980 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 SPTY2D1Q68D10 685 aaPredicted RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 TDRD7Q8NHU6 1098 aaKnown RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 KIF23Q02241 960 aaPredicted RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 RTN1Q16799 776 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 ATL3Q6DD88 541 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 WDR66Q8TBY9 1149 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
CCDC12-211ENST00000604367 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
CCDC12-211ENST00000604367 DIXDC1Q155Q3 683 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 MYSM1Q5VVJ2 828 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 KRT40Q6A162 431 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 ZNF654Q8IZM8 581 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 TMTC2Q8N394 836 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 APBA3O96018 575 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 CYP2D6P10635 497 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.4
CCDC12-211ENST00000604367 SSRP1Q08945 709 aaKnown RBP17.52■□□□□ 0.4
CCDC12-211ENST00000604367 GGA1Q9UJY5 639 aa17.52■□□□□ 0.4
CCDC12-211ENST00000604367 CCDC192P0DO97 292 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 GUCY1A2P33402 732 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 GNL2Q13823 731 aaKnown RBP17.51■□□□□ 0.39
CCDC12-211ENST00000604367 BRAPQ7Z569 592 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
CCDC12-211ENST00000604367 SEC23AQ15436 765 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
CCDC12-211ENST00000604367 ENAHQ8N8S7 591 aaPredicted RBP17.51■□□□□ 0.39
CCDC12-211ENST00000604367 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 CLSTN2Q9H4D0 955 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 CD209Q9NNX6 404 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 MCM9Q9NXL9 1143 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
CCDC12-211ENST00000604367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-211ENST00000604367 BBOX1O75936 387 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 FMNL1O95466 1100 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-211ENST00000604367 IFNAR1P17181 557 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 TRIM29Q14134 588 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 STK38Q15208 465 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 FANCBQ8NB91 859 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 PCDHA7Q9UN72 937 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
CCDC12-211ENST00000604367 COL23A1Q86Y22 540 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms