RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 USP17L3A6NCW0 530 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 USP17L4A6NCW7 530 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DHX16O60231 1041 aaKnown RBP14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 ZBTB7AO95365 584 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 LARGE1O95461 756 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 ANTXR2P58335 489 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 HMGN5P82970 282 aaKnown RBP14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 CTR9Q6PD62 1173 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 USP17L1Q7RTZ2 530 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 ESR2Q92731 530 aa14.47□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 WDR33Q9C0J8 1336 aaKnown RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 SH2B2O14492 632 aaPredicted RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 C21orf2O43822 256 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 BRD1O95696 1058 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 BTDP43251 543 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 RHBDL3P58872 404 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 PDE4BQ07343 736 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 ST3GAL1Q11201 340 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 R3HDM1Q15032 1099 aaKnown RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 NFKBIBQ15653 356 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DALRD3Q5D0E6 543 aaKnown RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DACT2Q5SW24 774 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 NOL8Q76FK4 1167 aaKnown RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 CCDC83Q8IWF9 413 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 TEKT1Q969V4 418 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 ZNF287Q9HBT7 754 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DAGLAQ9Y4D2 1042 aa14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 GREB1LQ9C091 1923 aaPredicted RBP14.46□□□□□ -0.09
NEDD8-MDP1-203ENST00000604306 DDX11L8A8MPP1 907 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 PPIP5K2O43314 1243 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 USP5P45974 858 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 COL9A3Q14050 684 aaPredicted RBP14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 PPP2R5BQ15173 497 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 DIXDC1Q155Q3 683 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 GRIK5Q16478 980 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 DOK7Q18PE1 504 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CCDC178Q5BJE1 867 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 C12orf60Q5U649 245 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CERS5Q8N5B7 392 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 IGDCC4Q8TDY8 1250 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TCEANC2Q96MN5 208 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ZDHHC15Q96MV8 337 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ANP32EQ9BTT0 268 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SERPINA10Q9UK55 444 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TTF2Q9UNY4 1162 aaKnown RBP14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ERICH2A1L162 156 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 B4E1Z4 1266 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 USP17L12C9JPN9 530 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 USP17L21D6R901 530 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 PTGER2P43116 358 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CTDSPL2Q05D32 466 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 AOC3Q16853 763 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SH3RF3Q8TEJ3 882 aaPredicted RBP14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 DBNDD1Q9H9R9 158 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SIPA1L1O43166 1804 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 MINDY4BA8MYZ0 360 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 KDM4AO75164 1064 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 GJB2P29033 226 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 APOBRQ0VD83 1088 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CYB5R4Q7L1T6 521 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TEX11Q8IYF3 940 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 LY9Q9HBG7 655 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 MCM9Q9NXL9 1143 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ZSWIM5Q9P217 1185 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 ATP6V1DQ9Y5K8 247 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SBF1O95248 1867 aa14.43□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 FLT1P17948 1338 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 STX6O43752 255 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CDKL5O76039 1030 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SCRN1Q12765 414 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 APOA5Q6Q788 366 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 UBAC1Q9BSL1 405 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 COL4A5P29400 1685 aa14.42□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 KLF18A0A0U1RQI7 1052 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 VIL1P09327 827 aaKnown RBP14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 SYT1P21579 422 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 MCM4P33991 863 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 IARSP41252 1262 aaKnown RBP14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CRKP46108 304 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 WTAPQ15007 396 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TMEM67Q5HYA8 995 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 CPLX2Q6PUV4 134 aaKnown RBP14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 NECAB1Q8N987 351 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 AGBL3Q8NEM8 1001 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TGFBRAP1Q8WUH2 860 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 LRRC2Q9BYS8 371 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TAOK3Q9H2K8 898 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
NEDD8-MDP1-203ENST00000604306 TACC3Q9Y6A5 838 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms