RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ZNF131P52739 623 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ZNF132P52740 706 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ADCY2Q08462 1091 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 GRM1Q13255 1194 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 SPECC1Q5M775 1068 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 TTLL5Q6EMB2 1281 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 PHLDB3Q6NSJ2 640 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ARHGAP27Q6ZUM4 889 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 NDUFAF2Q8N183 169 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 MTMR14Q8NCE2 650 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 GIMAP7Q8NHV1 300 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 EPS8L1Q8TE68 723 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 DNAAF4Q8WXU2 420 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 FAXDC2Q96IV6 333 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 RWDD1Q9H446 243 aaPredicted RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 TSPY26PQ9H489 355 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CHCHD3Q9NX63 227 aaKnown RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CHMP3Q9Y3E7 222 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 BRD4O60885 1362 aaPredicted RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ANKRD18BA2A2Z9 1011 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 POLR3GO15318 223 aaPredicted RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 HTATSF1O43719 755 aaKnown RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 FGAP02671 866 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 FBXO38Q6PIJ6 1188 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CENPTQ96BT3 561 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 TRIM11Q96F44 468 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 KANSL2Q9H9L4 492 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CAPN10Q9HC96 672 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 GINM1Q9NU53 330 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 LMBRD1Q9NUN5 540 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 RNF17Q9BXT8 1623 aaKnown RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ARHGAP5Q13017 1502 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 PTPRTO14522 1441 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 INSRP06213 1382 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 A6NCN8 305 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CCP110O43303 1012 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 MYCLP1P12525 358 aaPredicted RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 FOSL1P15407 271 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 CA8P35219 290 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 FAM69CQ0P6D2 419 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 AGAP9Q5VTM2 703 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 SPRYD7Q5W111 196 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 WWC2Q6AWC2 1192 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 PCGF5Q86SE9 256 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 RTF1Q92541 710 aaKnown RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 SMARCE1Q969G3 411 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 MIEF2Q96C03 454 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 TEX13AQ9BXU3 409 aaPredicted RBP5.44□□□□□ -1.54
LINC01109-201ENST00000603837 ACBD3Q9H3P7 528 aa5.44□□□□□ -1.54
LINC01109-201ENST00000603837 SHTN1A0MZ66 631 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 EIF3CLB5ME19 914 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 KINO60870 393 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 RGS20O76081 388 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 NEFHP12036 1026 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 MNAT1P51948 309 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PDXDC1Q6P996 788 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 CCDC89Q8N998 374 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 MPP4Q96JB8 637 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 MPHOSPH9Q99550 1183 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 EIF3CQ99613 913 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 SLC7A5P2Q9GIP4 190 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 RNF19AQ9NV58 838 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PYCARDQ9ULZ3 195 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PREX2Q70Z35 1606 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 KIF5CO60282 957 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 RAPGEF3O95398 923 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 BPNT1O95861 308 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 IVLP07476 585 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PDGFRBP09619 1106 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 ST5P78524 1137 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 TRAF1Q13077 416 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PPP2R5CQ13362 524 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 BRD3Q15059 726 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 DDB1Q16531 1140 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 TRIM74Q86UV6 250 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 TRIM73Q86UV7 250 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 LMNTD2Q8IXW0 634 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 CHPFQ8IZ52 775 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 ZNF713Q8N859 430 aaPredicted RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 ARMC2Q8NEN0 867 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 SH3KBP1Q96B97 665 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 GJD4Q96KN9 370 aaPredicted RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 TACO1Q9BSH4 297 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 XPO4Q9C0E2 1151 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 AVENQ9NQS1 362 aaPredicted RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 AKAP2Q9Y2D5 859 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 PTPRCP08575 1304 aa5.43□□□□□ -1.54
LINC01109-201ENST00000603837 KDM5AP29375 1690 aaKnown RBP5.43□□□□□ -1.54
LINC01109-201ENST00000603837 CDC42BPBQ9Y5S2 1711 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 C21orf2O43822 256 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 ADCY5O95622 1261 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 CPP00450 1065 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 SMARCA1P28370 1054 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 USP8P40818 1118 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 PEX19P40855 299 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 MARSP56192 900 aaKnown RBP5.42□□□□□ -1.54
LINC01109-201ENST00000603837 ZRSR1Q15695 479 aaKnown RBP5.42□□□□□ -1.54
LINC01109-201ENST00000603837 LINC01559Q495D7 138 aa5.42□□□□□ -1.54
LINC01109-201ENST00000603837 RASGRP2Q7LDG7 609 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms