RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SERPINB3P29508 390 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 MCM5P33992 734 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 DDB1Q16531 1140 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 WASHC4Q2M389 1173 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L2Q6R6M4 530 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 USP17L1Q7RTZ2 530 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 LCA5Q86VQ0 697 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PARD3BQ8TEW8 1205 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 CENPTQ96BT3 561 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PAWRQ96IZ0 340 aaKnown RBP5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PRIMPOLQ96LW4 560 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 VIRMAQ69YN4 1812 aaKnown RBP5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 ATP10BO94823 1461 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 CTAGE5O15320 804 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 ICMTO60725 284 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 COQ9O75208 318 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 NR1I2O75469 434 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PGRP06401 933 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PAX7P23759 505 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 IL4RP24394 825 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PEX19P40855 299 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 LRCH2Q5VUJ6 765 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PDXDC2PQ6P474 469 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 CPXCR1Q8N123 301 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 ZFPM2Q8WW38 1151 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 SLKQ9H2G2 1235 aaPredicted RBP5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 SH3GLB2Q9NR46 395 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 PLXNC1O60486 1568 aa5.86□□□□□ -1.47
SPTBN1-206ENST00000602898 C19orf81C9J6K1 198 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 IFIT2P09913 472 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 SLC4A3P48751 1232 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 EIF5P55010 431 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 PIP4K2BP78356 416 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 TRDNQ13061 729 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ELOAQ14241 798 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 RASA3Q14644 834 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 KMT5BQ4FZB7 885 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 LAPTM4BQ86VI4 370 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ARL10Q8N8L6 244 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 HVCN1Q96D96 273 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 MPP4Q96JB8 637 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ZC3H13Q5T200 1668 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 CAMSAP2Q08AD1 1489 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 SLFN14P0C7P3 912 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ATF4P18848 351 aaPredicted RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 COL19A1Q14993 1142 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 DIXDC1Q155Q3 683 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 UNC5DQ6UXZ4 953 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 PGBD4Q96DM1 585 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 THAP11Q96EK4 314 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 OGFRQ9NZT2 677 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 LEMD3Q9Y2U8 911 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 CCNB3Q8WWL7 1395 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 A2ML1A8K2U0 1454 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 TCEA3O75764 348 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 S1PR4O95977 384 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 LDHBP07195 334 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 SNX16P57768 344 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 KCNH2Q12809 1159 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 PTCRAQ6ISU1 281 aaPredicted RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 CFAP161Q6P656 301 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 LVRNQ6Q4G3 990 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ZSCAN29Q8IWY8 852 aaPredicted RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 RGL4Q8IZJ4 473 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 APPL2Q8NEU8 664 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 SERINC2Q96SA4 455 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 USB1Q9BQ65 265 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 CNNM2Q9H8M5 875 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 RSPH14Q9UHP6 348 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 DDX41Q9UJV9 622 aaKnown RBP5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 NUDCQ9Y266 331 aa5.85□□□□□ -1.47
SPTBN1-206ENST00000602898 ADGBQ8N7X0 1667 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 AKAP10O43572 662 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 IL33O95760 270 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 HALP42357 657 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 ST13P50502 369 aaKnown RBP5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 BPIFB3P59826 476 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 TAF1CQ15572 869 aaPredicted RBP5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 LINC01559Q495D7 138 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 OR8H2Q8N162 312 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 PPHLN1Q8NEY8 458 aaKnown RBP5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 CLP1Q92989 425 aaKnown RBP5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 SPSB2Q99619 263 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 CARD14Q9BXL6 1004 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 ABCG4Q9H172 646 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 UPF2Q9HAU5 1272 aaKnown RBP5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 ACAD8Q9UKU7 415 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 MAFFQ9ULX9 164 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 SUFUQ9UMX1 484 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 PAXBP1Q9Y5B6 917 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 FGD6Q6ZV73 1430 aa5.84□□□□□ -1.47
SPTBN1-206ENST00000602898 NEFHP12036 1026 aa5.84□□□□□ -1.48
SPTBN1-206ENST00000602898 ETFBP38117 255 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 619.6 ms