RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 FAM198AQ9UFP1 575 aa17.81■□□□□ 0.44
HCG18-245ENST00000602550 COL6A3P12111 3177 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 SLC5A1P13866 664 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 PTPRAP18433 802 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 GADL1Q6ZQY3 521 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 ANKRD44Q8N8A2 993 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 SMCR8Q8TEV9 937 aaPredicted RBP17.8■□□□□ 0.44
HCG18-245ENST00000602550 PAWRQ96IZ0 340 aaKnown RBP17.8■□□□□ 0.44
HCG18-245ENST00000602550 AFG3L2Q9Y4W6 797 aa17.8■□□□□ 0.44
HCG18-245ENST00000602550 PHF20L1A8MW92 1017 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 LDHBP07195 334 aaKnown RBP17.79■□□□□ 0.44
HCG18-245ENST00000602550 DIXDC1Q155Q3 683 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 ANKLE1Q8NAG6 615 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 LPIN2Q92539 896 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 GDF15Q99988 308 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
HCG18-245ENST00000602550 LRRFIP2Q9Y608 721 aaKnown RBP17.79■□□□□ 0.44
HCG18-245ENST00000602550 LAMA3Q16787 3333 aa17.79■□□□□ 0.44
HCG18-245ENST00000602550 CCDC184Q52MB2 194 aa17.78■□□□□ 0.44
HCG18-245ENST00000602550 KLHDC4Q8TBB5 520 aa17.78■□□□□ 0.44
HCG18-245ENST00000602550 GNL3LQ9NVN8 582 aaKnown RBP17.78■□□□□ 0.44
HCG18-245ENST00000602550 TAOK2Q9UL54 1235 aa17.78■□□□□ 0.44
HCG18-245ENST00000602550 ALPK3Q96L96 1907 aa17.77■□□□□ 0.44
HCG18-245ENST00000602550 ENTPD3O75355 529 aa17.77■□□□□ 0.44
HCG18-245ENST00000602550 IDI2Q9BXS1 227 aa17.77■□□□□ 0.44
HCG18-245ENST00000602550 PNMA3Q9UL41 463 aa17.77■□□□□ 0.44
HCG18-245ENST00000602550 PTPRFP10586 1907 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 EYA2O00167 538 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 CTNND1O60716 968 aaKnown RBP17.76■□□□□ 0.43
HCG18-245ENST00000602550 PRDX5P30044 214 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 MAP3K10Q02779 954 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 ZSCAN29Q8IWY8 852 aaPredicted RBP17.76■□□□□ 0.43
HCG18-245ENST00000602550 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
HCG18-245ENST00000602550 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.433e-7■□□□□ 10.3
HCG18-245ENST00000602550 DOCK2Q92608 1830 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 RGS3P49796 1198 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 LRIT3Q3SXY7 679 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 C7orf61Q8IZ16 206 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 AGTPBP1Q9UPW5 1226 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 STXBP5LQ9Y2K9 1186 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
HCG18-245ENST00000602550 SALL1Q9NSC2 1324 aa17.74■□□□□ 0.43
HCG18-245ENST00000602550 MYH2Q9UKX2 1941 aa17.74■□□□□ 0.43
HCG18-245ENST00000602550 HMGCRP04035 888 aa17.74■□□□□ 0.43
HCG18-245ENST00000602550 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
HCG18-245ENST00000602550 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
HCG18-245ENST00000602550 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
HCG18-245ENST00000602550 DENND2AQ9ULE3 1009 aa17.74■□□□□ 0.43
HCG18-245ENST00000602550 RPTORQ8N122 1335 aa17.73■□□□□ 0.43
HCG18-245ENST00000602550 TRIM75PA6NK02 468 aa17.73■□□□□ 0.43
HCG18-245ENST00000602550 SEMA3EO15041 775 aa17.73■□□□□ 0.43
HCG18-245ENST00000602550 SLF2Q8IX21 1173 aa17.73■□□□□ 0.43
HCG18-245ENST00000602550 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
HCG18-245ENST00000602550 ZMYND8Q9ULU4 1186 aaPredicted RBP17.73■□□□□ 0.43
HCG18-245ENST00000602550 DOCK1Q14185 1865 aa17.72■□□□□ 0.43
HCG18-245ENST00000602550 GCLCP48506 637 aaPredicted RBP17.72■□□□□ 0.43
HCG18-245ENST00000602550 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.431e-8■■■■□ 22.8
HCG18-245ENST00000602550 TDHQ8IZJ6 230 aa17.72■□□□□ 0.43
HCG18-245ENST00000602550 PROCA1Q8NCQ7 364 aaPredicted RBP17.72■□□□□ 0.43
HCG18-245ENST00000602550 FBXO3Q9UK99 471 aa17.72■□□□□ 0.43
HCG18-245ENST00000602550 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
HCG18-245ENST00000602550 RFX5P48382 616 aaPredicted RBP17.71■□□□□ 0.43
HCG18-245ENST00000602550 ATP2B3Q16720 1220 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 USP44Q9H0E7 712 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 C11orf49Q9H6J7 331 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 CEP126Q9P2H0 1117 aa17.71■□□□□ 0.43
HCG18-245ENST00000602550 PTPRCP08575 1304 aa17.71■□□□□ 0.42
HCG18-245ENST00000602550 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
HCG18-245ENST00000602550 ZBTB22O15209 634 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 Q7L0L9 218 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 ATG9AQ7Z3C6 839 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 FAM163AQ96GL9 167 aaPredicted RBP17.7■□□□□ 0.42
HCG18-245ENST00000602550 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 GAKO14976 1311 aa17.7■□□□□ 0.42
HCG18-245ENST00000602550 TBC1D12O60347 775 aa17.69■□□□□ 0.42
HCG18-245ENST00000602550 MAGEA10P43363 369 aaPredicted RBP17.69■□□□□ 0.42
HCG18-245ENST00000602550 TREML2Q5T2D2 321 aa17.69■□□□□ 0.42
HCG18-245ENST00000602550 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
HCG18-245ENST00000602550 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
HCG18-245ENST00000602550 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
HCG18-245ENST00000602550 CIAO1O76071 339 aa17.68■□□□□ 0.42
HCG18-245ENST00000602550 SYN1P17600 705 aa17.68■□□□□ 0.42
HCG18-245ENST00000602550 SPP2Q13103 211 aa17.68■□□□□ 0.42
HCG18-245ENST00000602550 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
HCG18-245ENST00000602550 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
HCG18-245ENST00000602550 OSBPL5Q9H0X9 879 aaPredicted RBP17.68■□□□□ 0.42
HCG18-245ENST00000602550 OGDHLQ9ULD0 1010 aa17.68■□□□□ 0.42
HCG18-245ENST00000602550 RFX7Q2KHR2 1363 aa17.67■□□□□ 0.42
HCG18-245ENST00000602550 PHKA1P46020 1223 aa17.67■□□□□ 0.42
HCG18-245ENST00000602550 PICALMQ13492 652 aa17.67■□□□□ 0.42
HCG18-245ENST00000602550 ZNF280CQ8ND82 737 aa17.67■□□□□ 0.42
HCG18-245ENST00000602550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
HCG18-245ENST00000602550 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms