RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 CCDC146Q8IYE0 955 aa18.33■□□□□ 0.52
TRIM11-205ENST00000602308 ZNF594Q96JF6 807 aaPredicted RBP18.33■□□□□ 0.52
TRIM11-205ENST00000602308 ASB2Q96Q27 587 aa18.33■□□□□ 0.52
TRIM11-205ENST00000602308 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
TRIM11-205ENST00000602308 IQSEC3Q9UPP2 1182 aaPredicted RBP18.33■□□□□ 0.52
TRIM11-205ENST00000602308 PIEZO1Q92508 2521 aa18.33■□□□□ 0.52
TRIM11-205ENST00000602308 PHF20L1A8MW92 1017 aa18.32■□□□□ 0.52
TRIM11-205ENST00000602308 ZNF853P0CG23 659 aa18.32■□□□□ 0.52
TRIM11-205ENST00000602308 CYP2B6P20813 491 aa18.32■□□□□ 0.52
TRIM11-205ENST00000602308 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
TRIM11-205ENST00000602308 TREML2Q5T2D2 321 aa18.32■□□□□ 0.52
TRIM11-205ENST00000602308 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
TRIM11-205ENST00000602308 CCND3P30281 292 aaPredicted RBP18.31■□□□□ 0.52
TRIM11-205ENST00000602308 ATN1P54259 1190 aaPredicted RBP18.31■□□□□ 0.52
TRIM11-205ENST00000602308 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
TRIM11-205ENST00000602308 TRIM26Q12899 539 aaPredicted RBP18.31■□□□□ 0.52
TRIM11-205ENST00000602308 UBE4AQ14139 1066 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 C8orf58Q8NAV2 365 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 SNX27Q96L92 541 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 C1QTNF1Q9BXJ1 281 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 PRKAG2Q9UGJ0 569 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 AGTPBP1Q9UPW5 1226 aa18.31■□□□□ 0.52
TRIM11-205ENST00000602308 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 MAST2Q6P0Q8 1798 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 FOXO4P98177 505 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 NFIAQ12857 509 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 PLXNB2O15031 1838 aa18.3■□□□□ 0.52
TRIM11-205ENST00000602308 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 CCDC30Q5VVM6 783 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 TBC1D22AQ8WUA7 517 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 PPM1EQ8WY54 764 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 PICK1Q9NRD5 415 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
TRIM11-205ENST00000602308 PTPRFP10586 1907 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 RTP1P59025 263 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 FBXO33Q7Z6M2 555 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 ZFPM1Q8IX07 1006 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 BADQ92934 168 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.28■□□□□ 0.52
TRIM11-205ENST00000602308 THEGQ9P2T0 379 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 HCN4Q9Y3Q4 1203 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
TRIM11-205ENST00000602308 CCDC84Q86UT8 332 aaPredicted RBP18.27■□□□□ 0.52
TRIM11-205ENST00000602308 LRFN3Q9BTN0 628 aa18.27■□□□□ 0.52
TRIM11-205ENST00000602308 FAM198AQ9UFP1 575 aa18.27■□□□□ 0.52
TRIM11-205ENST00000602308 PNMA3Q9UL41 463 aa18.27■□□□□ 0.52
TRIM11-205ENST00000602308 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
TRIM11-205ENST00000602308 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
TRIM11-205ENST00000602308 XRCC5P13010 732 aaKnown RBP18.26■□□□□ 0.51
TRIM11-205ENST00000602308 GCLCP48506 637 aaPredicted RBP18.26■□□□□ 0.51
TRIM11-205ENST00000602308 MRPS5P82675 430 aaKnown RBP18.26■□□□□ 0.51
TRIM11-205ENST00000602308 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
TRIM11-205ENST00000602308 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
TRIM11-205ENST00000602308 G2E3Q7L622 706 aa18.26■□□□□ 0.51
TRIM11-205ENST00000602308 ALYREFQ86V81 257 aaKnown RBP18.26■□□□□ 0.51
TRIM11-205ENST00000602308 NECAB3Q96P71 396 aaPredicted RBP18.26■□□□□ 0.51
TRIM11-205ENST00000602308 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
TRIM11-205ENST00000602308 ZKSCAN1P17029 563 aaPredicted RBP18.24■□□□□ 0.51
TRIM11-205ENST00000602308 CCL14Q16627 93 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 LMBR1LQ6UX01 489 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 NUDT12Q9BQG2 462 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
TRIM11-205ENST00000602308 MAST3O60307 1309 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 FRAT2O75474 233 aaPredicted RBP18.23■□□□□ 0.51
TRIM11-205ENST00000602308 TAF7LQ5H9L4 462 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 ZNF576Q9H609 170 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 MYH16Q9H6N6 1097 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 PRDM5Q9NQX1 630 aaPredicted RBP18.23■□□□□ 0.51
TRIM11-205ENST00000602308 SUGT1Q9Y2Z0 365 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 DAGLAQ9Y4D2 1042 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
TRIM11-205ENST00000602308 PEX10O60683 326 aa18.22■□□□□ 0.51
TRIM11-205ENST00000602308 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
TRIM11-205ENST00000602308 TRMT44Q8IYL2 757 aaKnown RBP18.22■□□□□ 0.51
TRIM11-205ENST00000602308 PROCA1Q8NCQ7 364 aaPredicted RBP18.22■□□□□ 0.51
TRIM11-205ENST00000602308 USP6NLQ92738 828 aa18.22■□□□□ 0.51
TRIM11-205ENST00000602308 PUS3Q9BZE2 481 aaKnown RBP18.22■□□□□ 0.51
TRIM11-205ENST00000602308 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
TRIM11-205ENST00000602308 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
TRIM11-205ENST00000602308 MORF4L1Q9UBU8 362 aa18.22■□□□□ 0.51
TRIM11-205ENST00000602308 DNAJB2P25686 324 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 MAP3K10Q02779 954 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 SH3RF1Q7Z6J0 888 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 SOCS4Q8WXH5 440 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 RNPC3Q96LT9 517 aaKnown RBP18.21■□□□□ 0.51
TRIM11-205ENST00000602308 EPHX3Q9H6B9 360 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
TRIM11-205ENST00000602308 LRRFIP2Q9Y608 721 aaKnown RBP18.21■□□□□ 0.51
TRIM11-205ENST00000602308 XIRP2A4UGR9 3374 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 MUC6Q6W4X9 2439 aa18.21■□□□□ 0.51
TRIM11-205ENST00000602308 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
TRIM11-205ENST00000602308 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
TRIM11-205ENST00000602308 EPHB4P54760 987 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms