RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 TOMM70O94826 608 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
ZNF548-212ENST00000602086 CPA1P15085 419 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 APLP1P51693 650 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 EVCP57679 992 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 RHBDL3P58872 404 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 PPARAQ07869 468 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
ZNF548-212ENST00000602086 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 ZNRF3Q9ULT6 936 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 NAV1Q8NEY1 1877 aa17.01■□□□□ 0.31
ZNF548-212ENST00000602086 HSP90AA1P07900 732 aaKnown RBP17■□□□□ 0.31
ZNF548-212ENST00000602086 TOB2Q14106 344 aaPredicted RBP17■□□□□ 0.31
ZNF548-212ENST00000602086 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
ZNF548-212ENST00000602086 CTR9Q6PD62 1173 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 NIM1KQ8IY84 436 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
ZNF548-212ENST00000602086 FBXW7Q969H0 707 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 TEKT1Q969V4 418 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 ZDHHC15Q96MV8 337 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
ZNF548-212ENST00000602086 SERPINA10Q9UK55 444 aa17■□□□□ 0.31
ZNF548-212ENST00000602086 NFKBIEO00221 500 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 SLC3A2P08195 630 aaKnown RBP16.99■□□□□ 0.31
ZNF548-212ENST00000602086 Q6ZUG5 572 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 TAOK2Q9UL54 1235 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
ZNF548-212ENST00000602086 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 COL4A5P29400 1685 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 USP17L12C9JPN9 530 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 USP17L21D6R901 530 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 ORC4O43929 436 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
ZNF548-212ENST00000602086 USP5P45974 858 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
ZNF548-212ENST00000602086 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
ZNF548-212ENST00000602086 AMOTL1Q8IY63 956 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 GMLQ99445 158 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
ZNF548-212ENST00000602086 CRKP46108 304 aa16.97■□□□□ 0.31
ZNF548-212ENST00000602086 RASSF7Q02833 373 aa16.97■□□□□ 0.31
ZNF548-212ENST00000602086 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
ZNF548-212ENST00000602086 ZNF274Q96GC6 653 aaPredicted RBP16.97■□□□□ 0.31
ZNF548-212ENST00000602086 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
ZNF548-212ENST00000602086 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
ZNF548-212ENST00000602086 MYH1P12882 1939 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 MINDY4BA8MYZ0 360 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 PRC1O43663 620 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 ANTXR2P58335 489 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 CTDSPL2Q05D32 466 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
ZNF548-212ENST00000602086 DNAJC5GQ8N7S2 189 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
ZNF548-212ENST00000602086 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.96■□□□□ 0.31
ZNF548-212ENST00000602086 NEDD4P46934 1319 aa16.96■□□□□ 0.3
ZNF548-212ENST00000602086 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
ZNF548-212ENST00000602086 LIFRP42702 1097 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 FGD1P98174 961 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 ME3Q16798 604 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 TGFBRAP1Q8WUH2 860 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 ESR2Q92731 530 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 BRF1Q92994 677 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 SLKQ9H2G2 1235 aaPredicted RBP16.95■□□□□ 0.3
ZNF548-212ENST00000602086 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 FLT1P17948 1338 aa16.95■□□□□ 0.3
ZNF548-212ENST00000602086 DICER1Q9UPY3 1922 aaKnown RBP16.94■□□□□ 0.3
ZNF548-212ENST00000602086 B4E1Z4 1266 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
ZNF548-212ENST00000602086 PSMD14O00487 310 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 PFKFB2O60825 505 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 PDE4BQ07343 736 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 TNIP1Q15025 636 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 TMTC2Q8N394 836 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 ZNF287Q9HBT7 754 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 ANGEL1Q9UNK9 670 aaKnown RBP16.94■□□□□ 0.3
ZNF548-212ENST00000602086 TACC3Q9Y6A5 838 aa16.94■□□□□ 0.3
ZNF548-212ENST00000602086 SH2B2O14492 632 aaPredicted RBP16.93■□□□□ 0.3
ZNF548-212ENST00000602086 WDHD1O75717 1129 aaPredicted RBP16.93■□□□□ 0.3
ZNF548-212ENST00000602086 RPS12P25398 132 aaKnown RBP16.93■□□□□ 0.3
ZNF548-212ENST00000602086 SCNN1DP51172 638 aa16.93■□□□□ 0.3
ZNF548-212ENST00000602086 RCAN1P53805 252 aa16.93■□□□□ 0.3
ZNF548-212ENST00000602086 NUCB2P80303 420 aa16.93■□□□□ 0.3
ZNF548-212ENST00000602086 CXCL9Q07325 125 aa16.93■□□□□ 0.3
ZNF548-212ENST00000602086 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
ZNF548-212ENST00000602086 CIAPIN1Q6FI81 312 aa16.93■□□□□ 0.3
ZNF548-212ENST00000602086 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms