RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 ZBED9Q6R2W3 1325 aa6.45□□□□□ -1.38
VRK3-226ENST00000602029 ADCY3O60266 1144 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 UBTFL1P0CB47 393 aaPredicted RBP6.44□□□□□ -1.38
VRK3-226ENST00000602029 ELNP15502 786 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 PRDX5P30044 214 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 APOBEC3HQ6NTF7 200 aaKnown RBP6.44□□□□□ -1.38
VRK3-226ENST00000602029 CDC42EP5Q6NZY7 148 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 HHIPL2Q6UWX4 724 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
VRK3-226ENST00000602029 SLF2Q8IX21 1173 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 SLAIN1Q8ND83 568 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 U2AF1L4Q8WU68 220 aaKnown RBP6.44□□□□□ -1.38
VRK3-226ENST00000602029 FAM151AQ8WW52 585 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 COA7Q96BR5 231 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 DEFB118Q96PH6 123 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 NOL10Q9BSC4 688 aaKnown RBP6.44□□□□□ -1.38
VRK3-226ENST00000602029 TRIM34Q9BYJ4 488 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 UNC93B1Q9H1C4 597 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 FOXD4L1Q9NU39 408 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 STXBP5LQ9Y2K9 1186 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 SUGT1Q9Y2Z0 365 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 DAGLAQ9Y4D2 1042 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 CDH23Q9H251 3354 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 OTOFQ9HC10 1997 aa6.44□□□□□ -1.38
VRK3-226ENST00000602029 NCOR1O75376 2440 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 EYA2O00167 538 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 INHAP05111 366 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 GJB1P08034 283 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 FLT3LGP49771 235 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 RGS3P49796 1198 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 NFIAQ12857 509 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 FKBP1CQ5VVH2 108 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 C17orf99Q6UX52 265 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 C7orf61Q8IZ16 206 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 SCYL3Q8IZE3 742 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 ZGPATQ8N5A5 531 aaKnown RBP6.43□□□□□ -1.38
VRK3-226ENST00000602029 DEFB123Q8N688 67 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 ANKRD13CQ8N6S4 541 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 ANKRD44Q8N8A2 993 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
VRK3-226ENST00000602029 ECM29Q5VYK3 1845 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 CXCL11O14625 94 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 ZBTB7BO15156 539 aaPredicted RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 GJA8P48165 433 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 C1QBPQ07021 282 aaKnown RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 SPTY2D1Q68D10 685 aaPredicted RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 CCDC84Q86UT8 332 aaPredicted RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 NEUROD6Q96NK8 337 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
VRK3-226ENST00000602029 MTMR10Q9NXD2 777 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 PNMA3Q9UL41 463 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 ZMYND8Q9ULU4 1186 aaPredicted RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 GABRQQ9UN88 632 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 HDAC5Q9UQL6 1122 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 PTPRCP08575 1304 aa6.42□□□□□ -1.38
VRK3-226ENST00000602029 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
VRK3-226ENST00000602029 FAM196BA6NMK8 535 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 SGPL1O95470 568 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 PTPRAP18433 802 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 CTGFP29279 349 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 BTDP43251 543 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 PHKA1P46020 1223 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 IRX3P78415 501 aaPredicted RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 PABPC4Q13310 644 aaKnown RBP eCLIP6.41□□□□□ -1.38
VRK3-226ENST00000602029 OS9Q13438 667 aaPredicted RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 PDE3AQ14432 1141 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 RABL6Q3YEC7 729 aaPredicted RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 WDR78Q5VTH9 848 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 ERICH6Q7L0X2 663 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 NECAB2Q7Z6G3 386 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 UBE2Q1Q7Z7E8 422 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 ZFPM1Q8IX07 1006 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 CRACR2BQ8N4Y2 399 aaPredicted RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 MRPL50Q8N5N7 158 aaKnown RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 VGLL2Q8N8G2 317 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 KAZALD1Q96I82 304 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 PAWRQ96IZ0 340 aaKnown RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 RAI14Q9P0K7 980 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 FAM198AQ9UFP1 575 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 STAP2Q9UGK3 403 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 KCNH4Q9UQ05 1017 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 PA2G4Q9UQ80 394 aaKnown RBP6.41□□□□□ -1.38
VRK3-226ENST00000602029 DOCK3Q8IZD9 2030 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 ARAP2Q8WZ64 1704 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 MGAMO43451 1857 aa6.41□□□□□ -1.38
VRK3-226ENST00000602029 A0A0G2JLL6 359 aaPredicted RBP6.4□□□□□ -1.38
VRK3-226ENST00000602029 E9PSI1 815 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 CTNND1O60716 968 aaKnown RBP6.4□□□□□ -1.38
VRK3-226ENST00000602029 ENTPD3O75355 529 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 SYN1P17600 705 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 ADORA1P30542 326 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 PLA2G5P39877 138 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 IL15P40933 162 aaPredicted RBP6.4□□□□□ -1.38
VRK3-226ENST00000602029 HMGCS2P54868 508 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 GSTO1P78417 241 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 SPP2Q13103 211 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 MVPQ14764 893 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms