RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
FARP1-235ENST00000601656 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
FARP1-235ENST00000601656 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
FARP1-235ENST00000601656 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
FARP1-235ENST00000601656 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.5
FARP1-235ENST00000601656 KLRG2A4D1S0 409 aaPredicted RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 MARCH6O60337 910 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 RNF40O75150 1001 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 CAMTA2O94983 1202 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 CCNYL3P0C7X3 344 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 MAPK8P45983 427 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 PSMD2Q13200 908 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 NAA30Q147X3 362 aaPredicted RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 RNF20Q5VTR2 975 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 PSMD1Q99460 953 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
FARP1-235ENST00000601656 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
FARP1-235ENST00000601656 TRPA1O75762 1119 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 KCNC4Q03721 635 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 EHHADHQ08426 723 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 USP4Q13107 963 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 CTU1Q7Z7A3 348 aaKnown RBP11.94□□□□□ -0.5
FARP1-235ENST00000601656 DHX37Q8IY37 1157 aaKnown RBP11.94□□□□□ -0.5
FARP1-235ENST00000601656 TTC5Q8N0Z6 440 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
FARP1-235ENST00000601656 HUNKP57058 714 aa11.93□□□□□ -0.5
FARP1-235ENST00000601656 PRR14Q9BWN1 585 aa11.93□□□□□ -0.5
FARP1-235ENST00000601656 TEX13AQ9BXU3 409 aaPredicted RBP11.93□□□□□ -0.5
FARP1-235ENST00000601656 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
FARP1-235ENST00000601656 BCORQ6W2J9 1755 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 COL4A5P29400 1685 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 A1BGP04217 495 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 IGFBP4P22692 258 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 MPSTP25325 297 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 DNAJA1P31689 397 aaKnown RBP11.92□□□□□ -0.5
FARP1-235ENST00000601656 PPP4CP60510 307 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
FARP1-235ENST00000601656 TPTE2Q6XPS3 522 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 PIF1Q9H611 641 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 GPRC5DQ9NZD1 345 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
FARP1-235ENST00000601656 ARID5AQ03989 594 aa11.91□□□□□ -0.5
FARP1-235ENST00000601656 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
FARP1-235ENST00000601656 ZNF496Q96IT1 587 aaPredicted RBP11.91□□□□□ -0.5
FARP1-235ENST00000601656 PGAP2Q9UHJ9 254 aa11.91□□□□□ -0.5
FARP1-235ENST00000601656 MRC1P22897 1456 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
FARP1-235ENST00000601656 IGHA2P01877 340 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 TNNI2P48788 182 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 RGMBQ6NW40 437 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 CLEC4GQ6UXB4 293 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 SH3BP5LQ7L8J4 393 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 CERS3Q8IU89 383 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 MICAL1Q8TDZ2 1067 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 ALKBH8Q96BT7 664 aaKnown RBP11.9□□□□□ -0.5
FARP1-235ENST00000601656 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 SPACA7Q96KW9 195 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 RNF19AQ9NV58 838 aa11.9□□□□□ -0.5
FARP1-235ENST00000601656 POLR2AP24928 1970 aaKnown RBP11.89□□□□□ -0.51
FARP1-235ENST00000601656 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 NIM1KQ8IY84 436 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 FAM129BQ96TA1 746 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
FARP1-235ENST00000601656 SNED1Q8TER0 1413 aa11.88□□□□□ -0.51
FARP1-235ENST00000601656 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
FARP1-235ENST00000601656 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
FARP1-235ENST00000601656 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
FARP1-235ENST00000601656 PKN2Q16513 984 aaKnown RBP11.88□□□□□ -0.51
FARP1-235ENST00000601656 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
FARP1-235ENST00000601656 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
FARP1-235ENST00000601656 NIP7Q9Y221 180 aaKnown RBP eCLIP11.88□□□□□ -0.51
FARP1-235ENST00000601656 ZNF652Q9Y2D9 606 aa11.88□□□□□ -0.51
FARP1-235ENST00000601656 TCERG1O14776 1098 aaKnown RBP11.87□□□□□ -0.51
FARP1-235ENST00000601656 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
FARP1-235ENST00000601656 IL13P35225 146 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
FARP1-235ENST00000601656 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
FARP1-235ENST00000601656 CXCL9Q07325 125 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 MTHFSDQ2M296 383 aaKnown RBP11.87□□□□□ -0.51
FARP1-235ENST00000601656 DLK2Q6UY11 383 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 GPATCH3Q96I76 525 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 INPP5FQ9Y2H2 1132 aa11.87□□□□□ -0.51
FARP1-235ENST00000601656 DLL1O00548 723 aa11.86□□□□□ -0.51
FARP1-235ENST00000601656 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
FARP1-235ENST00000601656 FZD6O60353 706 aa11.86□□□□□ -0.51
FARP1-235ENST00000601656 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
FARP1-235ENST00000601656 PTPROQ16827 1216 aa11.86□□□□□ -0.51
FARP1-235ENST00000601656 ALG1LQ6GMV1 187 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms