RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 BCRP11274 1271 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 CCL5P13501 91 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 BTDP43251 543 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 FCGRTP55899 365 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 TIMM10P62072 90 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 CHRDL2Q6WN34 429 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 MEIS3Q99687 375 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 RNF208Q9H0X6 261 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 GABRQQ9UN88 632 aa10.34□□□□□ -0.75
CCDC9-206ENST00000601154 GAKO14976 1311 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 A0A0G2JLL6 359 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 DDTLA6NHG4 134 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 PHF20L1A8MW92 1017 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 ENTPD3O75355 529 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 PTPRAP18433 802 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 UBXN2AP68543 259 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 PRRT2Q7Z6L0 340 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 ZGPATQ8N5A5 531 aaKnown RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 SMCR8Q8TEV9 937 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 IDI2Q9BXS1 227 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 API5Q9BZZ5 524 aaKnown RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 DDX4Q9NQI0 724 aaKnown RBP10.33□□□□□ -0.76
CCDC9-206ENST00000601154 RFX7Q2KHR2 1363 aa10.33□□□□□ -0.76
CCDC9-206ENST00000601154 A0A1B0GUL7 405 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 TNPO2O14787 897 aaKnown RBP10.32□□□□□ -0.76
CCDC9-206ENST00000601154 GJB1P08034 283 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 ELNP15502 786 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 TFCP2Q12800 502 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 FASTKD5Q7L8L6 764 aaKnown RBP10.32□□□□□ -0.76
CCDC9-206ENST00000601154 NKX2-3Q8TAU0 364 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 COPRSQ9NQ92 184 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 AFG3L2Q9Y4W6 797 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 MYH13Q9UKX3 1938 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 MROH7-TTC4A0A0A0MT08 1334 aa10.32□□□□□ -0.76
CCDC9-206ENST00000601154 SRGAP3O43295 1099 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 ADCY3O60266 1144 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 FARP2O94887 1054 aaPredicted RBP10.31□□□□□ -0.76
CCDC9-206ENST00000601154 GJA8P48165 433 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 FLT3LGP49771 235 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 MECOMQ03112 1051 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 SLAIN1Q8ND83 568 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 U2AF1L4Q8WU68 220 aaKnown RBP10.31□□□□□ -0.76
CCDC9-206ENST00000601154 XAGE2Q96GT9 111 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 NEUROD6Q96NK8 337 aa10.31□□□□□ -0.76
CCDC9-206ENST00000601154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.31□□□□□ -0.76
CCDC9-206ENST00000601154 CTNND1O60716 968 aaKnown RBP10.3□□□□□ -0.76
CCDC9-206ENST00000601154 INHAP05111 366 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 MVPQ14764 893 aaKnown RBP10.3□□□□□ -0.76
CCDC9-206ENST00000601154 TREML2Q5T2D2 321 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
CCDC9-206ENST00000601154 TBC1D9Q6ZT07 1266 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 ERICH6Q7L0X2 663 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 ANKRD13CQ8N6S4 541 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 ZNF384Q8TF68 577 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 HTATIP2Q9BUP3 242 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.3□□□□□ -0.76
CCDC9-206ENST00000601154 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 RBM27Q9P2N5 1060 aaKnown RBP10.3□□□□□ -0.76
CCDC9-206ENST00000601154 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 DOCK2Q92608 1830 aa10.3□□□□□ -0.76
CCDC9-206ENST00000601154 AK9Q5TCS8 1911 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 RHBDL3P58872 404 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 UBE2Q1Q7Z7E8 422 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 TRMT2AQ8IZ69 625 aaKnown RBP10.29□□□□□ -0.76
CCDC9-206ENST00000601154 DEFB118Q96PH6 123 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 HMG20BQ9P0W2 317 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 TNNQ9UQP3 1299 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 AKAP2Q9Y2D5 859 aa10.29□□□□□ -0.76
CCDC9-206ENST00000601154 PDS5AQ29RF7 1337 aaKnown RBP10.29□□□□□ -0.76
CCDC9-206ENST00000601154 GPR75-ASB3A0A0A6YYF3 556 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 SGPL1O95470 568 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 TFRCP02786 760 aaKnown RBP10.28□□□□□ -0.76
CCDC9-206ENST00000601154 GNAI3P08754 354 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 CT47B1P0C2W7 299 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-206ENST00000601154 RARSP54136 660 aaKnown RBP10.28□□□□□ -0.76
CCDC9-206ENST00000601154 HMGCS2P54868 508 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 MAP3K10Q02779 954 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 SPP2Q13103 211 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 SPATA5Q8NB90 893 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-206ENST00000601154 OSBPL5Q9H0X9 879 aaPredicted RBP10.28□□□□□ -0.76
CCDC9-206ENST00000601154 SLC45A1Q9Y2W3 748 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 TRIOBPQ9H2D6 2365 aa10.28□□□□□ -0.76
CCDC9-206ENST00000601154 CEP290O15078 2479 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 GSTO1P78417 241 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 RRP1BQ14684 758 aaKnown RBP10.27□□□□□ -0.77
CCDC9-206ENST00000601154 TEX11Q8IYF3 940 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 FRAT1Q92837 279 aaPredicted RBP10.27□□□□□ -0.77
CCDC9-206ENST00000601154 COA7Q96BR5 231 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 NSUN4Q96CB9 384 aaKnown RBP10.27□□□□□ -0.77
CCDC9-206ENST00000601154 PNMA3Q9UL41 463 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 NR2E3Q9Y5X4 410 aa10.27□□□□□ -0.77
CCDC9-206ENST00000601154 MYH2Q9UKX2 1941 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms