RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	NPM3	O75607	178 aa	Known RBP	18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	MAP4K4	O95819	1239 aa	Predicted RBP	18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	PICALM	Q13492	652 aa		18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	NAA16	Q6N069	864 aa	Predicted RBP	18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	ZNF112	Q9UJU3	913 aa		18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	NDUFB9	Q9Y6M9	179 aa		18.92	■□□□□ 0.62
PLD3-223	ENST00000600948	IGF2BP3	O00425	579 aa	Known RBP eCLIP	18.91	■□□□□ 0.62
PLD3-223	ENST00000600948	TBC1D8	O95759	1140 aa		18.91	■□□□□ 0.62
PLD3-223	ENST00000600948	INPP5B	P32019	993 aa		18.91	■□□□□ 0.62
PLD3-223	ENST00000600948	IFNL1	Q8IU54	200 aa		18.91	■□□□□ 0.62
PLD3-223	ENST00000600948	CFHR5	Q9BXR6	569 aa		18.91	■□□□□ 0.62
PLD3-223	ENST00000600948	COL2A1	P02458	1487 aa	Predicted RBP	18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	TESPA1	A2RU30	521 aa	Predicted RBP	18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	DDTL	A6NHG4	134 aa	Predicted RBP	18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	ADGRA1	Q86SQ6	560 aa		18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	ERO1B	Q86YB8	467 aa		18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	OTUD5	Q96G74	571 aa		18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	MS4A4A	Q96JQ5	239 aa		18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	ANTXR1	Q9H6X2	564 aa		18.9	■□□□□ 0.62
PLD3-223	ENST00000600948	ALDH1A1	P00352	501 aa		18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	IFIT2	P09913	472 aa	Known RBP	18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	PPP4C	P60510	307 aa		18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	MAP3K10	Q02779	954 aa		18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	TEX11	Q8IYF3	940 aa		18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	NOL10	Q9BSC4	688 aa	Known RBP	18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
PLD3-223	ENST00000600948	SIPA1L1	O43166	1804 aa		18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	DOCK1	Q14185	1865 aa		18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	IDH1	O75874	414 aa	Known RBP	18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	NOM1	Q5C9Z4	860 aa	Known RBP	18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	NOL9	Q5SY16	702 aa	Known RBP	18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	PTPN18	Q99952	460 aa		18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	R3HDML	Q9H3Y0	253 aa		18.88	■□□□□ 0.61
PLD3-223	ENST00000600948	PHF20L1	A8MW92	1017 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	BAG3	O95817	575 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	SLURP2	P0DP57	97 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	PLCG2	P16885	1265 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	GTF2A2	P52657	109 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	BRI3BP	Q8WY22	251 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	LRRCC1	Q9C099	1032 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	BCL11A	Q9H165	835 aa		18.87	■□□□□ 0.61
PLD3-223	ENST00000600948	PHIP	Q8WWQ0	1821 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	GPR25	O00155	361 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	CYP7A1	P22680	504 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	PPIL2	Q13356	520 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	MCOLN1	Q9GZU1	580 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	DCTPP1	Q9H773	170 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	PCDHB15	Q9Y5E8	787 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	MYH1	P12882	1939 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	ATAD5	Q96QE3	1844 aa		18.86	■□□□□ 0.61
PLD3-223	ENST00000600948	PTPRF	P10586	1907 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	MYH7	P12883	1935 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	CCL15-CCL14	A0A0B4J2E2	113 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	IRF6	O14896	467 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	SMARCA5	O60264	1052 aa	Predicted RBP	18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	CAPN15	O75808	1086 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	DYNLL1	P63167	89 aa	Known RBP	18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	PPAT	Q06203	517 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	MAP3K12	Q12852	859 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	DGKZ	Q13574	1117 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	CCL15	Q16663	113 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	OTUD7B	Q6GQQ9	843 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	MAGEB6	Q8N7X4	407 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	ABHD8	Q96I13	439 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	CRBN	Q96SW2	442 aa		18.85	■□□□□ 0.61
PLD3-223	ENST00000600948	TBC1D12	O60347	775 aa		18.84	■□□□□ 0.61
PLD3-223	ENST00000600948	ATP5J	P18859	108 aa		18.84	■□□□□ 0.61
PLD3-223	ENST00000600948	TTF1	Q15361	905 aa	Predicted RBP	18.84	■□□□□ 0.61
PLD3-223	ENST00000600948	TMED8	Q6PL24	325 aa	Predicted RBP	18.84	■□□□□ 0.61
PLD3-223	ENST00000600948	FLT1	P17948	1338 aa		18.83	■□□□□ 0.61
PLD3-223	ENST00000600948	GOLIM4	O00461	696 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	CETP	P11597	493 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	SNAPC2	Q13487	334 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	SCYL3	Q8IZE3	742 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	TGFBRAP1	Q8WUH2	860 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	DNAJC2	Q99543	621 aa	Known RBP	18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	KCNH4	Q9UQ05	1017 aa		18.83	■□□□□ 0.6
PLD3-223	ENST00000600948	FAM196B	A6NMK8	535 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	CRHR2	Q13324	411 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	CTU1	Q7Z7A3	348 aa	Known RBP	18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	MAPKAPK5	Q8IW41	473 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	FAM43A	Q8N2R8	423 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	MIGA1	Q8NAN2	632 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	EDC3	Q96F86	508 aa	Known RBP	18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	BOLA2	Q9H3K6	86 aa		18.82	■□□□□ 0.6
PLD3-223	ENST00000600948	DDX60L	Q5H9U9	1706 aa	Known RBP	18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	CTNND1	O60716	968 aa	Known RBP	18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	FKTN	O75072	461 aa		18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	PDE6A	P16499	860 aa		18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	CERS3	Q8IU89	383 aa		18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	HAUS7	Q99871	368 aa		18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	DHX36	Q9H2U1	1008 aa	Known RBP	18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
PLD3-223	ENST00000600948	NAV1	Q8NEY1	1877 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms