RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 NOL10Q9BSC4 688 aaKnown RBP20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 MYO5AQ9Y4I1 1855 aaKnown RBP20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 SNCAIPQ9Y6H5 919 aa20.57■□□□□ 0.88
NOTCH3-205ENST00000600841 SPDYE5A6NIY4 337 aa20.56■□□□□ 0.88
NOTCH3-205ENST00000600841 IGSF3O75054 1194 aa20.56■□□□□ 0.88
NOTCH3-205ENST00000600841 ERO1BQ86YB8 467 aa20.56■□□□□ 0.88
NOTCH3-205ENST00000600841 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
NOTCH3-205ENST00000600841 DDX4Q9NQI0 724 aaKnown RBP20.56■□□□□ 0.88
NOTCH3-205ENST00000600841 TESPA1A2RU30 521 aaPredicted RBP20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 IGF2BP3O00425 579 aaKnown RBP eCLIP20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 NPM3O75607 178 aaKnown RBP20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 GTF2A2P52657 109 aa20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 DGKZQ13574 1117 aa20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 NOM1Q5C9Z4 860 aaKnown RBP20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 ABHD8Q96I13 439 aa20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 MCOLN1Q9GZU1 580 aa20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 PIH1D3Q9NQM4 214 aaKnown RBP20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 ZNF112Q9UJU3 913 aa20.55■□□□□ 0.88
NOTCH3-205ENST00000600841 BAG3O95817 575 aa20.54■□□□□ 0.88
NOTCH3-205ENST00000600841 INPP5BP32019 993 aa20.54■□□□□ 0.88
NOTCH3-205ENST00000600841 SH3BP5LQ7L8J4 393 aa20.54■□□□□ 0.88
NOTCH3-205ENST00000600841 TEX11Q8IYF3 940 aa20.54■□□□□ 0.88
NOTCH3-205ENST00000600841 MS4A4AQ96JQ5 239 aa20.54■□□□□ 0.88
NOTCH3-205ENST00000600841 DDTLA6NHG4 134 aaPredicted RBP20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 GPR25O00155 361 aa20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 IFIT2P09913 472 aaKnown RBP20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 PLCG2P16885 1265 aa20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 ZNF296Q8WUU4 475 aaPredicted RBP20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
NOTCH3-205ENST00000600841 CCL15-CCL14A0A0B4J2E2 113 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 IDH1O75874 414 aaKnown RBP20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 PPIL2Q13356 520 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 CCL15Q16663 113 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 SH3RF3Q8TEJ3 882 aaPredicted RBP20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 BRI3BPQ8WY22 251 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 PTPN18Q99952 460 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 R3HDMLQ9H3Y0 253 aa20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
NOTCH3-205ENST00000600841 IRF6O14896 467 aa20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 PPP4CP60510 307 aa20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 PPATQ06203 517 aa20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 SNAPC2Q13487 334 aa20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 NOL9Q5SY16 702 aaKnown RBP20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 CTU1Q7Z7A3 348 aaKnown RBP20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 NDUFB9Q9Y6M9 179 aa20.51■□□□□ 0.87
NOTCH3-205ENST00000600841 COL2A1P02458 1487 aaPredicted RBP20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 FKTNO75072 461 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 CETPP11597 493 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 CYP7A1P22680 504 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 MAP3K10Q02779 954 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 MAP3K12Q12852 859 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 ADGRA1Q86SQ6 560 aa20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
NOTCH3-205ENST00000600841 PHF20L1A8MW92 1017 aa20.49■□□□□ 0.87
NOTCH3-205ENST00000600841 CRHR2Q13324 411 aa20.49■□□□□ 0.87
NOTCH3-205ENST00000600841 ANTXR1Q9H6X2 564 aa20.49■□□□□ 0.87
NOTCH3-205ENST00000600841 CDK5RAP2Q96SN8 1893 aa20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 TTF1Q15361 905 aaPredicted RBP20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 TMED8Q6PL24 325 aaPredicted RBP20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 MAGEB6Q8N7X4 407 aa20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 LRRCC1Q9C099 1032 aa20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 PICK1Q9NRD5 415 aa20.48■□□□□ 0.87
NOTCH3-205ENST00000600841 TBC1D12O60347 775 aa20.47■□□□□ 0.87
NOTCH3-205ENST00000600841 SCYL3Q8IZE3 742 aa20.47■□□□□ 0.87
NOTCH3-205ENST00000600841 TGFBRAP1Q8WUH2 860 aa20.47■□□□□ 0.87
NOTCH3-205ENST00000600841 FOCADQ5VW36 1801 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 CCDC85CA6NKD9 419 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 CTNND1O60716 968 aaKnown RBP20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 TAF1CQ15572 869 aaPredicted RBP20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 CERS3Q8IU89 383 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 DNAJC2Q99543 621 aaKnown RBP20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 KCNH4Q9UQ05 1017 aa20.46■□□□□ 0.87
NOTCH3-205ENST00000600841 DOCK1Q14185 1865 aa20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 SLURP2P0DP57 97 aa20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 DYNLL1P63167 89 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 PKN2Q16513 984 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 DHX36Q9H2U1 1008 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 ZFYVE28Q9HCC9 887 aa20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 ZCCHC17Q9NP64 241 aaKnown RBP20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 FLT1P17948 1338 aa20.45■□□□□ 0.86
NOTCH3-205ENST00000600841 FAM196BA6NMK8 535 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 GOLIM4O00461 696 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 DCTPP1Q9H773 170 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 PI4KBQ9UBF8 816 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 ZHX2Q9Y6X8 837 aa20.44■□□□□ 0.86
NOTCH3-205ENST00000600841 CXCL11O14625 94 aa20.43■□□□□ 0.86
NOTCH3-205ENST00000600841 SMARCA5O60264 1052 aaPredicted RBP20.43■□□□□ 0.86
NOTCH3-205ENST00000600841 PTPRAP18433 802 aa20.43■□□□□ 0.86
NOTCH3-205ENST00000600841 ATP5JP18859 108 aa20.43■□□□□ 0.86
NOTCH3-205ENST00000600841 HERC5Q9UII4 1024 aaKnown RBP20.43■□□□□ 0.86
NOTCH3-205ENST00000600841 PDE6AP16499 860 aa20.42■□□□□ 0.86
NOTCH3-205ENST00000600841 SLC9C2Q5TAH2 1124 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms