RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 SLC39A14Q15043 492 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 PHKBQ93100 1093 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 TRIM10Q9UDY6 481 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 TFR2Q9UP52 801 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 A1BGP04217 495 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 INPP5BP32019 993 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 CCT6AP40227 531 aaKnown RBP18.31■□□□□ 0.52
SYDE1-204ENST00000600440 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 VPS37DQ86XT2 251 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 SUGP1Q8IWZ8 645 aaKnown RBP18.31■□□□□ 0.52
SYDE1-204ENST00000600440 PEAK1Q9H792 1746 aa18.31■□□□□ 0.52
SYDE1-204ENST00000600440 MMP14P50281 582 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 BRAPQ7Z569 592 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 FAM76AQ8TAV0 307 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 HSPD1P10809 573 aaKnown RBP18.3■□□□□ 0.52
SYDE1-204ENST00000600440 ATP5JP18859 108 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 CDC25AP30304 524 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 MAN1B1Q9UKM7 699 aa18.3■□□□□ 0.52
SYDE1-204ENST00000600440 GOLGA6CA6NDK9 693 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 CLGNO14967 610 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 POLR2DO15514 142 aaKnown RBP18.29■□□□□ 0.52
SYDE1-204ENST00000600440 PRC1O43663 620 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 GOLGA6DP0CG33 693 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 JMYQ8N9B5 988 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 ZNF274Q96GC6 653 aaPredicted RBP18.29■□□□□ 0.52
SYDE1-204ENST00000600440 GOLGA6AQ9NYA3 693 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 MYO1FO00160 1098 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 CASP1P29466 404 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 SETQ01105 290 aaPredicted RBP18.29■□□□□ 0.52
SYDE1-204ENST00000600440 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
SYDE1-204ENST00000600440 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 SMYD4Q8IYR2 804 aaPredicted RBP18.29■□□□□ 0.52
SYDE1-204ENST00000600440 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
SYDE1-204ENST00000600440 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 TIMM10P62072 90 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 GNGT1P63211 74 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 MYD88Q99836 296 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 SERTAD1Q9UHV2 236 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 TMEM131LA2VDJ0 1609 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 SHTN1A0MZ66 631 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 AFMP43652 599 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 GRIN1Q05586 938 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
SYDE1-204ENST00000600440 HPCAL4Q9UM19 191 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
SYDE1-204ENST00000600440 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
SYDE1-204ENST00000600440 OVOS2A0A0J9YW53 1432 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 OVOS2Q6IE36 1432 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 TDO2P48775 406 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 GBP6Q6ZN66 633 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 CCDC82Q8N4S0 544 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 CEP89Q96ST8 783 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 KDRP35968 1356 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.52
SYDE1-204ENST00000600440 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 ZNF530Q6P9A1 599 aaPredicted RBP18.27■□□□□ 0.52
SYDE1-204ENST00000600440 GIMAP7Q8NHV1 300 aa18.27■□□□□ 0.52
SYDE1-204ENST00000600440 CDHR2Q9BYE9 1310 aa18.27■□□□□ 0.51
SYDE1-204ENST00000600440 HOXC9P31274 260 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 IRAK1P51617 712 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 POSTNQ15063 836 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 RALYLQ86SE5 291 aaKnown RBP18.26■□□□□ 0.51
SYDE1-204ENST00000600440 MICU3Q86XE3 530 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 NUP88Q99567 741 aaPredicted RBP18.26■□□□□ 0.51
SYDE1-204ENST00000600440 ZEB2O60315 1214 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
SYDE1-204ENST00000600440 TRDNQ13061 729 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 UBE3BQ7Z3V4 1068 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 KRT40Q6A162 431 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 MYL10Q9BUA6 226 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 FAM107BQ9H098 131 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
SYDE1-204ENST00000600440 PRPF6O94906 941 aaKnown RBP18.25■□□□□ 0.51
SYDE1-204ENST00000600440 SCP2P22307 547 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 USP8P40818 1118 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 PAG1Q9NWQ8 432 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 ATP5J2-PTCD1G3V325 749 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
SYDE1-204ENST00000600440 CPP00450 1065 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 MYBL2P10244 700 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 MATR3P43243 847 aaKnown RBP eCLIP18.25■□□□□ 0.51
SYDE1-204ENST00000600440 ATP1A2P50993 1020 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 WHAMMP3Q1A5X7 153 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 SWT1Q5T5J6 900 aaKnown RBP18.25■□□□□ 0.51
SYDE1-204ENST00000600440 MMS19Q96T76 1030 aa18.25■□□□□ 0.51
SYDE1-204ENST00000600440 RNF187Q5TA31 235 aaPredicted RBP18.24■□□□□ 0.51
SYDE1-204ENST00000600440 CPLX2Q6PUV4 134 aaKnown RBP18.24■□□□□ 0.51
SYDE1-204ENST00000600440 CTCFLQ8NI51 663 aaPredicted RBP18.24■□□□□ 0.51
SYDE1-204ENST00000600440 CAPS2Q9BXY5 557 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms