RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 CFHR5Q9BXR6 569 aa17.53■□□□□ 0.4
IRF3-224ENST00000599680 ZBTB40Q9NUA8 1239 aa17.53■□□□□ 0.4
IRF3-224ENST00000599680 TLR7Q9NYK1 1049 aaKnown RBP17.53■□□□□ 0.4
IRF3-224ENST00000599680 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
IRF3-224ENST00000599680 MYH1P12882 1939 aa17.53■□□□□ 0.4
IRF3-224ENST00000599680 FKTNO75072 461 aa17.52■□□□□ 0.4
IRF3-224ENST00000599680 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.4
IRF3-224ENST00000599680 NOM1Q5C9Z4 860 aaKnown RBP17.52■□□□□ 0.4
IRF3-224ENST00000599680 NAA16Q6N069 864 aaPredicted RBP17.52■□□□□ 0.4
IRF3-224ENST00000599680 ZFPM1Q8IX07 1006 aa17.52■□□□□ 0.4
IRF3-224ENST00000599680 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
IRF3-224ENST00000599680 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
IRF3-224ENST00000599680 WDHD1O75717 1129 aaPredicted RBP17.51■□□□□ 0.39
IRF3-224ENST00000599680 BAG3O95817 575 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 INPP5BP32019 993 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 ZAP70P43403 619 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 RHPN1Q8TCX5 695 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 ZNF384Q8TF68 577 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 KIF1BPQ96EK5 621 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 MYH7P12883 1935 aa17.51■□□□□ 0.39
IRF3-224ENST00000599680 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
IRF3-224ENST00000599680 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
IRF3-224ENST00000599680 CETPP11597 493 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 PPIL2Q13356 520 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 SNAPC2Q13487 334 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 TEX11Q8IYF3 940 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 CLASRPQ8N2M8 674 aaKnown RBP17.5■□□□□ 0.39
IRF3-224ENST00000599680 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 DDX4Q9NQI0 724 aaKnown RBP17.5■□□□□ 0.39
IRF3-224ENST00000599680 PTPRFP10586 1907 aa17.5■□□□□ 0.39
IRF3-224ENST00000599680 PHIPQ8WWQ0 1821 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 PLCG2P16885 1265 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 RHBDL3P58872 404 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 PPATQ06203 517 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 CRHR2Q13324 411 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 BRI3BPQ8WY22 251 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 R3HDMLQ9H3Y0 253 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
IRF3-224ENST00000599680 DDTLA6NHG4 134 aaPredicted RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 IRF6O14896 467 aa17.48■□□□□ 0.39
IRF3-224ENST00000599680 IGSF3O75054 1194 aa17.48■□□□□ 0.39
IRF3-224ENST00000599680 RAB11FIP3O75154 756 aa17.48■□□□□ 0.39
IRF3-224ENST00000599680 IDH1O75874 414 aaKnown RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 IFIT2P09913 472 aaKnown RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 TAF1CQ15572 869 aaPredicted RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 PKN2Q16513 984 aaKnown RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 PTPN18Q99952 460 aa17.48■□□□□ 0.39
IRF3-224ENST00000599680 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
IRF3-224ENST00000599680 AATFQ9NY61 560 aaKnown RBP eCLIP17.48■□□□□ 0.39
IRF3-224ENST00000599680 COL2A1P02458 1487 aaPredicted RBP17.48■□□□□ 0.39
IRF3-224ENST00000599680 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
IRF3-224ENST00000599680 NOL9Q5SY16 702 aaKnown RBP17.47■□□□□ 0.39
IRF3-224ENST00000599680 SH3BP5LQ7L8J4 393 aa17.47■□□□□ 0.39
IRF3-224ENST00000599680 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
IRF3-224ENST00000599680 SH3RF3Q8TEJ3 882 aaPredicted RBP17.47■□□□□ 0.39
IRF3-224ENST00000599680 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
IRF3-224ENST00000599680 ZFYVE28Q9HCC9 887 aa17.47■□□□□ 0.39
IRF3-224ENST00000599680 PIH1D3Q9NQM4 214 aaKnown RBP17.47■□□□□ 0.39
IRF3-224ENST00000599680 ATRNL1Q5VV63 1379 aa17.47■□□□□ 0.39
IRF3-224ENST00000599680 SIPA1L1O43166 1804 aa17.47■□□□□ 0.39
IRF3-224ENST00000599680 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
IRF3-224ENST00000599680 OSBPL5Q9H0X9 879 aaPredicted RBP17.46■□□□□ 0.39
IRF3-224ENST00000599680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
IRF3-224ENST00000599680 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.38
IRF3-224ENST00000599680 CYP7A1P22680 504 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 SCYL3Q8IZE3 742 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 NDUFB9Q9Y6M9 179 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 MYH8P13535 1937 aa17.45■□□□□ 0.38
IRF3-224ENST00000599680 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
IRF3-224ENST00000599680 SP3Q02447 781 aa17.44■□□□□ 0.38
IRF3-224ENST00000599680 TTF1Q15361 905 aaPredicted RBP17.44■□□□□ 0.38
IRF3-224ENST00000599680 CERS3Q8IU89 383 aa17.44■□□□□ 0.38
IRF3-224ENST00000599680 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
IRF3-224ENST00000599680 TRIM34Q9BYJ4 488 aa17.44■□□□□ 0.38
IRF3-224ENST00000599680 ZCCHC17Q9NP64 241 aaKnown RBP17.44■□□□□ 0.38
IRF3-224ENST00000599680 PHF20L1A8MW92 1017 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 BTBD19C9JJ37 291 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 PPP4CP60510 307 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 MAPKAPK5Q8IW41 473 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 MAGEB6Q8N7X4 407 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 CD99L2Q8TCZ2 262 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 DNAJC2Q99543 621 aaKnown RBP17.43■□□□□ 0.38
IRF3-224ENST00000599680 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
IRF3-224ENST00000599680 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 TRIM17Q9Y577 477 aa17.43■□□□□ 0.38
IRF3-224ENST00000599680 MGAMO43451 1857 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 FAM196BA6NMK8 535 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 TBC1D12O60347 775 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 MAP3K10Q02779 954 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 ARHGEF6Q15052 776 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 FBXO46Q6PJ61 603 aaPredicted RBP17.42■□□□□ 0.38
IRF3-224ENST00000599680 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
IRF3-224ENST00000599680 LRRCC1Q9C099 1032 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
IRF3-224ENST00000599680 HERC5Q9UII4 1024 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms