RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-213ENST00000599464 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.57
PRKD2-213ENST00000599464 CD99L2Q8TCZ2 262 aa11.52□□□□□ -0.57
PRKD2-213ENST00000599464 NSUN4Q96CB9 384 aaKnown RBP11.52□□□□□ -0.57
PRKD2-213ENST00000599464 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
PRKD2-213ENST00000599464 DBNDD2Q9BQY9 259 aa11.52□□□□□ -0.57
PRKD2-213ENST00000599464 CHMP4BQ9H444 224 aaKnown RBP11.52□□□□□ -0.57
PRKD2-213ENST00000599464 EFCC1Q9HA90 598 aa11.52□□□□□ -0.57
PRKD2-213ENST00000599464 SNRKQ9NRH2 765 aa11.52□□□□□ -0.57
PRKD2-213ENST00000599464 GPR75-ASB3A0A0A6YYF3 556 aa11.51□□□□□ -0.57
PRKD2-213ENST00000599464 MAP4K4O95819 1239 aaPredicted RBP11.51□□□□□ -0.57
PRKD2-213ENST00000599464 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
PRKD2-213ENST00000599464 FAM43AQ8N2R8 423 aa11.51□□□□□ -0.57
PRKD2-213ENST00000599464 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
PRKD2-213ENST00000599464 BCL11AQ9H165 835 aa11.51□□□□□ -0.57
PRKD2-213ENST00000599464 DDX19BQ9UMR2 479 aa11.51□□□□□ -0.57
PRKD2-213ENST00000599464 HMMRO75330 724 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 PLCG2P16885 1265 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
PRKD2-213ENST00000599464 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 ZFPM1Q8IX07 1006 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 TEX11Q8IYF3 940 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 SCYL3Q8IZE3 742 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 TRIM34Q9BYJ4 488 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRKD2-213ENST00000599464 ZCCHC17Q9NP64 241 aaKnown RBP11.5□□□□□ -0.57
PRKD2-213ENST00000599464 DDX4Q9NQI0 724 aaKnown RBP11.5□□□□□ -0.57
PRKD2-213ENST00000599464 ZNF112Q9UJU3 913 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 EXOC6BQ9Y2D4 811 aa11.5□□□□□ -0.57
PRKD2-213ENST00000599464 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
PRKD2-213ENST00000599464 DDTLA6NHG4 134 aaPredicted RBP11.49□□□□□ -0.57
PRKD2-213ENST00000599464 BTBD19C9JJ37 291 aa11.49□□□□□ -0.57
PRKD2-213ENST00000599464 APBB1O00213 710 aa11.49□□□□□ -0.57
PRKD2-213ENST00000599464 RGS19P49795 217 aa11.49□□□□□ -0.57
PRKD2-213ENST00000599464 AACSQ86V21 672 aa11.49□□□□□ -0.57
PRKD2-213ENST00000599464 AATFQ9NY61 560 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRKD2-213ENST00000599464 COG6Q9Y2V7 657 aa11.49□□□□□ -0.57
PRKD2-213ENST00000599464 PDHXO00330 501 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 TLR2O60603 784 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 IDH1O75874 414 aaKnown RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 ZAP70P43403 619 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 RHBDL3P58872 404 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 ANKRD23Q86SG2 305 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 RPAP2Q8IXW5 612 aaPredicted RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 OSBPL5Q9H0X9 879 aaPredicted RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 TLR7Q9NYK1 1049 aaKnown RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 DBNLQ9UJU6 430 aaKnown RBP11.48□□□□□ -0.57
PRKD2-213ENST00000599464 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 RFX7Q2KHR2 1363 aa11.48□□□□□ -0.57
PRKD2-213ENST00000599464 LAMB1P07942 1786 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 CTNND1O60716 968 aaKnown RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 IGSF3O75054 1194 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 CYP2E1P05181 493 aaPredicted RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 SH3BP5LQ7L8J4 393 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 FASTKD5Q7L8L6 764 aaKnown RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
PRKD2-213ENST00000599464 IL1RAPL2Q9NP60 686 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 KCNH4Q9UQ05 1017 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 MYH2Q9UKX2 1941 aa11.47□□□□□ -0.57
PRKD2-213ENST00000599464 ATRNL1Q5VV63 1379 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 PHF20L1A8MW92 1017 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 CXCL11O14625 94 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 HLA-DOAP06340 250 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 IFIT2P09913 472 aaKnown RBP11.46□□□□□ -0.57
PRKD2-213ENST00000599464 PTPRAP18433 802 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 CYP7A1P22680 504 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 MAP3K12Q12852 859 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 SLC9C1Q4G0N8 1177 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 NBPF11Q86T75 865 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 CERS3Q8IU89 383 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 ZNF384Q8TF68 577 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 TGFBRAP1Q8WUH2 860 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 KIF1BPQ96EK5 621 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.57
PRKD2-213ENST00000599464 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.57
PRKD2-213ENST00000599464 CPA4Q9UI42 421 aa11.46□□□□□ -0.57
PRKD2-213ENST00000599464 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
PRKD2-213ENST00000599464 DOCK2Q92608 1830 aa11.46□□□□□ -0.58
PRKD2-213ENST00000599464 COL2A1P02458 1487 aaPredicted RBP11.45□□□□□ -0.58
PRKD2-213ENST00000599464 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 TBC1D12O60347 775 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 HOXD10P28358 340 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 USP5P45974 858 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 LACTBP83111 547 aaPredicted RBP11.45□□□□□ -0.58
PRKD2-213ENST00000599464 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
PRKD2-213ENST00000599464 MAPKAPK5Q8IW41 473 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 MAGEB6Q8N7X4 407 aa11.45□□□□□ -0.58
PRKD2-213ENST00000599464 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
PRKD2-213ENST00000599464 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms