RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PICK1Q9NRD5 415 aa26.25■■□□□ 1.79
PNKP-212ENST00000599454 ADORA1P30542 326 aa26.24■■□□□ 1.79
PNKP-212ENST00000599454 RASGRF1Q13972 1273 aa26.24■■□□□ 1.79
PNKP-212ENST00000599454 AKAP2Q9Y2D5 859 aa26.24■■□□□ 1.79
PNKP-212ENST00000599454 MYPNQ86TC9 1320 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 MAP3K10Q02779 954 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 GPAT2Q6NUI2 795 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 NKX2-3Q8TAU0 364 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 ARHGAP45Q92619 1136 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 MEIS3Q99687 375 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 ABCF2Q9UG63 623 aa26.23■■□□□ 1.79
PNKP-212ENST00000599454 A0A0G2JLL6 359 aaPredicted RBP26.22■■□□□ 1.79
PNKP-212ENST00000599454 GNAI3P08754 354 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 BCRP11274 1271 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 GRK4P32298 578 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 FCGRTP55899 365 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 PRRT2Q7Z6L0 340 aaPredicted RBP26.22■■□□□ 1.79
PNKP-212ENST00000599454 ZSCAN29Q8IWY8 852 aaPredicted RBP26.22■■□□□ 1.79
PNKP-212ENST00000599454 SLC45A1Q9Y2W3 748 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 ZHX2Q9Y6X8 837 aa26.22■■□□□ 1.79
PNKP-212ENST00000599454 PTPRAP18433 802 aa26.21■■□□□ 1.79
PNKP-212ENST00000599454 TIMM10P62072 90 aa26.21■■□□□ 1.79
PNKP-212ENST00000599454 MVPQ14764 893 aaKnown RBP26.21■■□□□ 1.79
PNKP-212ENST00000599454 DOCK3Q8IZD9 2030 aa26.21■■□□□ 1.79
PNKP-212ENST00000599454 MROH7-TTC4A0A0A0MT08 1334 aa26.2■■□□□ 1.79
PNKP-212ENST00000599454 A0A1B0GUL7 405 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 CTNND1O60716 968 aaKnown RBP26.2■■□□□ 1.78
PNKP-212ENST00000599454 ECM2O94769 699 aaPredicted RBP26.2■■□□□ 1.78
PNKP-212ENST00000599454 MTX1Q13505 466 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 SH3BP5LQ7L8J4 393 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 XAGE2Q96GT9 111 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 AFG3L2Q9Y4W6 797 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 TRIOBPQ9H2D6 2365 aa26.2■■□□□ 1.78
PNKP-212ENST00000599454 ATAD5Q96QE3 1844 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 SRGAP3O43295 1099 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 NPM3O75607 178 aaKnown RBP26.19■■□□□ 1.78
PNKP-212ENST00000599454 CYP2C8P10632 490 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 BTDP43251 543 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 MTFR1Q15390 333 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 ERICH6Q7L0X2 663 aa26.19■■□□□ 1.78
PNKP-212ENST00000599454 MAP4K4O95819 1239 aaPredicted RBP26.18■■□□□ 1.78
PNKP-212ENST00000599454 RARSP54136 660 aaKnown RBP26.18■■□□□ 1.78
PNKP-212ENST00000599454 UBXN2AP68543 259 aa26.18■■□□□ 1.78
PNKP-212ENST00000599454 GPR75-ASB3A0A0A6YYF3 556 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 DDTLA6NHG4 134 aaPredicted RBP26.17■■□□□ 1.78
PNKP-212ENST00000599454 GJB1P08034 283 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 TFCP2Q12800 502 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 GADL1Q6ZQY3 521 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 SLAIN1Q8ND83 568 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 SHISA4Q96DD7 197 aa26.17■■□□□ 1.78
PNKP-212ENST00000599454 DDX4Q9NQI0 724 aaKnown RBP26.17■■□□□ 1.78
PNKP-212ENST00000599454 TBC1D12O60347 775 aa26.16■■□□□ 1.78
PNKP-212ENST00000599454 GJA8P48165 433 aa26.16■■□□□ 1.78
PNKP-212ENST00000599454 PRKCZQ05513 592 aa26.16■■□□□ 1.78
PNKP-212ENST00000599454 PICALMQ13492 652 aa26.16■■□□□ 1.78
PNKP-212ENST00000599454 LDHCP07864 332 aa26.15■■□□□ 1.78
PNKP-212ENST00000599454 CCL5P13501 91 aa26.15■■□□□ 1.78
PNKP-212ENST00000599454 FXR1P51114 621 aaKnown RBP eCLIP26.15■■□□□ 1.78
PNKP-212ENST00000599454 GSTO1P78417 241 aa26.15■■□□□ 1.78
PNKP-212ENST00000599454 MECOMQ03112 1051 aa26.15■■□□□ 1.78
PNKP-212ENST00000599454 BIN2Q9UBW5 565 aaPredicted RBP26.15■■□□□ 1.78
PNKP-212ENST00000599454 COLQQ9Y215 455 aaPredicted RBP26.15■■□□□ 1.78
PNKP-212ENST00000599454 COL2A1P02458 1487 aaPredicted RBP26.15■■□□□ 1.78
PNKP-212ENST00000599454 H0YGN5 161 aa26.14■■□□□ 1.78
PNKP-212ENST00000599454 RHBDL3P58872 404 aa26.14■■□□□ 1.78
PNKP-212ENST00000599454 RNF208Q9H0X6 261 aa26.14■■□□□ 1.78
PNKP-212ENST00000599454 LOC285556D6RIA3 1793 aa26.14■■□□□ 1.78
PNKP-212ENST00000599454 IPO8O15397 1037 aaKnown RBP26.13■■□□□ 1.77
PNKP-212ENST00000599454 SMCR8Q8TEV9 937 aaPredicted RBP26.13■■□□□ 1.77
PNKP-212ENST00000599454 NEUROD6Q96NK8 337 aa26.13■■□□□ 1.77
PNKP-212ENST00000599454 CAPN2P17655 700 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 GORABQ5T7V8 394 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 SPATA5Q8NB90 893 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 HTATIP2Q9BUP3 242 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 OSBPL5Q9H0X9 879 aaPredicted RBP26.12■■□□□ 1.77
PNKP-212ENST00000599454 HMG20BQ9P0W2 317 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 AGTPBP1Q9UPW5 1226 aa26.12■■□□□ 1.77
PNKP-212ENST00000599454 TRIM75PA6NK02 468 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 UBE2Q1Q7Z7E8 422 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 PXYLP1Q8TE99 480 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 ZNF384Q8TF68 577 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 TBC1D2Q9BYX2 928 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 PNMA3Q9UL41 463 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 GABRQQ9UN88 632 aa26.11■■□□□ 1.77
PNKP-212ENST00000599454 GNAI2P04899 355 aa26.1■■□□□ 1.77
PNKP-212ENST00000599454 ARID4AP29374 1257 aaPredicted RBP26.1■■□□□ 1.77
PNKP-212ENST00000599454 IRF5Q13568 498 aa26.1■■□□□ 1.77
PNKP-212ENST00000599454 PROCA1Q8NCQ7 364 aaPredicted RBP26.1■■□□□ 1.77
PNKP-212ENST00000599454 DPF3Q92784 378 aa26.1■■□□□ 1.77
PNKP-212ENST00000599454 NSUN4Q96CB9 384 aaKnown RBP26.1■■□□□ 1.77
PNKP-212ENST00000599454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.1■■□□□ 1.77
PNKP-212ENST00000599454 MAST2Q6P0Q8 1798 aa26.1■■□□□ 1.77
PNKP-212ENST00000599454 CDK5RAP2Q96SN8 1893 aa26.09■■□□□ 1.77
PNKP-212ENST00000599454 TNPO2O14787 897 aaKnown RBP26.09■■□□□ 1.77
PNKP-212ENST00000599454 ADCY3O60266 1144 aa26.09■■□□□ 1.77
PNKP-212ENST00000599454 CCER2I3L3R5 266 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 UQCRFS1P1P0C7P4 283 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 SLURP2P0DP57 97 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 FLT3LGP49771 235 aa26.08■■□□□ 1.77
PNKP-212ENST00000599454 G3BP1Q13283 466 aaKnown RBP eCLIP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms