RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LDHBP07195 334 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 GBP1P32455 592 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 RNF34Q969K3 372 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 LRRC59Q96AG4 307 aaKnown RBP13.23□□□□□ -0.29
SCN8A-208ENST00000599343 CSRNP2Q9H175 543 aa13.23□□□□□ -0.29
SCN8A-208ENST00000599343 DTNBO60941 627 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 UIMC1Q96RL1 719 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 NSFL1CQ9UNZ2 370 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 MRC2Q9UBG0 1479 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 RPS6KB1P23443 525 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 ZNF365Q70YC5 407 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 TTC36A6NLP5 189 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 ACTN4O43707 911 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 EIF6P56537 245 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 NCOA5Q9HCD5 579 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 MAEAQ7L5Y9 396 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 SDCCAG8Q86SQ7 713 aaPredicted RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
SCN8A-208ENST00000599343 ITIH3Q06033 890 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 FAM114A2Q9NRY5 505 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 FAM184BQ9ULE4 1060 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 USTQ9Y2C2 406 aa13.22□□□□□ -0.29
SCN8A-208ENST00000599343 PLCD1P51178 756 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 VWA3BQ502W6 1294 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.21□□□□□ -0.29
SCN8A-208ENST00000599343 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 MSH6P52701 1360 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 TRIM14Q14142 442 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 PLCG2P16885 1265 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 VCX3BQ9H321 246 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
SCN8A-208ENST00000599343 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.29
SCN8A-208ENST00000599343 CD109Q6YHK3 1445 aa13.21□□□□□ -0.3
SCN8A-208ENST00000599343 TOPBP1Q92547 1522 aa13.21□□□□□ -0.3
SCN8A-208ENST00000599343 A0A1B0GUA9 196 aa13.21□□□□□ -0.3
SCN8A-208ENST00000599343 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.3
SCN8A-208ENST00000599343 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.3
SCN8A-208ENST00000599343 KIF14Q15058 1648 aa13.21□□□□□ -0.3
SCN8A-208ENST00000599343 KIF3CO14782 793 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 CEP104O60308 925 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 TXKP42681 527 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 ZNF75DP51815 510 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 ASIC3Q9UHC3 531 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 B4DLN1 442 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 DAPK3O43293 454 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 MRPL12P52815 198 aaKnown RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 ZC3H12CQ9C0D7 883 aaKnown RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 SLC27A2O14975 620 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 VSIG1Q86XK7 387 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 CLSTN2Q9H4D0 955 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 TACC3Q9Y6A5 838 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 TXNDC9O14530 226 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 PAK1Q13153 545 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 HHATQ5VTY9 493 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 NYXQ9GZU5 481 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 RRAGDQ9NQL2 400 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-208ENST00000599343 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
SCN8A-208ENST00000599343 RAD50Q92878 1312 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 GOLGA6BA6NDN3 693 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-208ENST00000599343 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
SCN8A-208ENST00000599343 ERCC6LQ2NKX8 1250 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 CTTNBP2NLQ9P2B4 639 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-208ENST00000599343 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 NCAPH2Q6IBW4 605 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 CCDC117Q8IWD4 279 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-208ENST00000599343 DEXIO95424 95 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms