RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
SMG9-207ENST00000598860 ZNF211Q13398 564 aaPredicted RBP13.23□□□□□ -0.29
SMG9-207ENST00000598860 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
SMG9-207ENST00000598860 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
SMG9-207ENST00000598860 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
SMG9-207ENST00000598860 IGFBP4P22692 258 aa13.22□□□□□ -0.29
SMG9-207ENST00000598860 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
SMG9-207ENST00000598860 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
SMG9-207ENST00000598860 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
SMG9-207ENST00000598860 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
SMG9-207ENST00000598860 BIN2Q9UBW5 565 aaPredicted RBP13.22□□□□□ -0.29
SMG9-207ENST00000598860 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
SMG9-207ENST00000598860 USP3Q9Y6I4 520 aa13.22□□□□□ -0.29
SMG9-207ENST00000598860 MMP10P09238 476 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 SNRPA1P09661 255 aaKnown RBP13.21□□□□□ -0.29
SMG9-207ENST00000598860 PHKA2P46019 1235 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 EPHA4P54764 986 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 CAPN12Q6ZSI9 719 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 RHBDD1Q8TEB9 315 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 CD2APQ9Y5K6 639 aa13.21□□□□□ -0.29
SMG9-207ENST00000598860 H3BRB1 525 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 CDK2AP1O14519 115 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 KCNQ3O43525 872 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 GYS1P13807 737 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
SMG9-207ENST00000598860 GPR162Q16538 588 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 C4orf17Q53FE4 359 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 NLGN2Q8NFZ4 835 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
SMG9-207ENST00000598860 SCG3Q8WXD2 468 aaKnown RBP13.2□□□□□ -0.3
SMG9-207ENST00000598860 TUT1Q9H6E5 874 aaKnown RBP13.2□□□□□ -0.3
SMG9-207ENST00000598860 ANO2Q9NQ90 1003 aa13.2□□□□□ -0.3
SMG9-207ENST00000598860 SCHIP1Q9P0W5 487 aaPredicted RBP13.2□□□□□ -0.3
SMG9-207ENST00000598860 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
SMG9-207ENST00000598860 VAMP4O75379 141 aa13.19□□□□□ -0.3
SMG9-207ENST00000598860 CANXP27824 592 aaKnown RBP13.19□□□□□ -0.3
SMG9-207ENST00000598860 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
SMG9-207ENST00000598860 TBCELQ5QJ74 424 aa13.19□□□□□ -0.3
SMG9-207ENST00000598860 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
SMG9-207ENST00000598860 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
SMG9-207ENST00000598860 ERBB4Q15303 1308 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 ICMTO60725 284 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 COL26A1Q96A83 441 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
SMG9-207ENST00000598860 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
SMG9-207ENST00000598860 SRP68Q9UHB9 627 aaKnown RBP13.18□□□□□ -0.3
SMG9-207ENST00000598860 ZBTB1Q9Y2K1 713 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 PARP3Q9Y6F1 533 aa13.18□□□□□ -0.3
SMG9-207ENST00000598860 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
SMG9-207ENST00000598860 N4BP2Q86UW6 1770 aaPredicted RBP13.17□□□□□ -0.3
SMG9-207ENST00000598860 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
SMG9-207ENST00000598860 FOXK2Q01167 660 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 DNAJC14Q6Y2X3 702 aaPredicted RBP13.17□□□□□ -0.3
SMG9-207ENST00000598860 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 GLYCTKQ8IVS8 523 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 TIMMDC1Q9NPL8 285 aa13.17□□□□□ -0.3
SMG9-207ENST00000598860 A0A087WZG4 1122 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
SMG9-207ENST00000598860 C21orf2O43822 256 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 YY1P25490 414 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 VEGFBP49765 207 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
SMG9-207ENST00000598860 NARFQ9UHQ1 456 aa13.16□□□□□ -0.3
SMG9-207ENST00000598860 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
SMG9-207ENST00000598860 PPFIA3O75145 1194 aa13.15□□□□□ -0.3
SMG9-207ENST00000598860 A1BGP04217 495 aa13.15□□□□□ -0.3
SMG9-207ENST00000598860 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
SMG9-207ENST00000598860 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
SMG9-207ENST00000598860 MARSP56192 900 aaKnown RBP13.15□□□□□ -0.3
SMG9-207ENST00000598860 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
SMG9-207ENST00000598860 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
SMG9-207ENST00000598860 IL6STP40189 918 aaPredicted RBP13.14□□□□□ -0.31
SMG9-207ENST00000598860 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
SMG9-207ENST00000598860 ZNF775Q96BV0 537 aaPredicted RBP13.14□□□□□ -0.31
SMG9-207ENST00000598860 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
SMG9-207ENST00000598860 DBF4Q9UBU7 674 aaPredicted RBP13.14□□□□□ -0.31
SMG9-207ENST00000598860 COL15A1P39059 1388 aa13.14□□□□□ -0.31
SMG9-207ENST00000598860 C4AP0C0L4 1744 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 ARFGEF2Q9Y6D5 1785 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 ERCC3P19447 782 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
SMG9-207ENST00000598860 TM4SF1P30408 202 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 MTMR3Q13615 1198 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
SMG9-207ENST00000598860 ZNF295-AS1Q8N0V1 137 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 GAS2L1Q99501 681 aaPredicted RBP13.13□□□□□ -0.31
SMG9-207ENST00000598860 DYRK1BQ9Y463 629 aa13.13□□□□□ -0.31
SMG9-207ENST00000598860 ANKRD36CQ5JPF3 1778 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 BCORQ6W2J9 1755 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 NUP98P52948 1817 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms