RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 DBNLQ9UJU6 430 aaKnown RBP16.9■□□□□ 0.3
SCAF1-203ENST00000598359 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
SCAF1-203ENST00000598359 GPR75-ASB3A0A0A6YYF3 556 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
SCAF1-203ENST00000598359 GTF2A2P52657 109 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 ERO1BQ86YB8 467 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
SCAF1-203ENST00000598359 FAM43AQ8N2R8 423 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 MKI67P46013 3256 aaKnown RBP16.89■□□□□ 0.29
SCAF1-203ENST00000598359 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
SCAF1-203ENST00000598359 APBB1O00213 710 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 IRF6O14896 467 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 ENTPD3O75355 529 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
SCAF1-203ENST00000598359 ZAP70P43403 619 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
SCAF1-203ENST00000598359 OTUD7BQ6GQQ9 843 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 ZNF112Q9UJU3 913 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
SCAF1-203ENST00000598359 MS4A1P11836 297 aa16.87■□□□□ 0.29
SCAF1-203ENST00000598359 GSTO1P78417 241 aa16.87■□□□□ 0.29
SCAF1-203ENST00000598359 PPIL2Q13356 520 aa16.87■□□□□ 0.29
SCAF1-203ENST00000598359 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
SCAF1-203ENST00000598359 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
SCAF1-203ENST00000598359 PIH1D3Q9NQM4 214 aaKnown RBP16.87■□□□□ 0.29
SCAF1-203ENST00000598359 DOCK2Q92608 1830 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 FAM196BA6NMK8 535 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 LDHCP07864 332 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 CAP1Q01518 475 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 TAF1CQ15572 869 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-203ENST00000598359 SIRT2Q8IXJ6 389 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 CD99L2Q8TCZ2 262 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 SH3RF3Q8TEJ3 882 aaPredicted RBP16.86■□□□□ 0.29
SCAF1-203ENST00000598359 ZBTB40Q9NUA8 1239 aa16.86■□□□□ 0.29
SCAF1-203ENST00000598359 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 BTBD19C9JJ37 291 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 CETPP11597 493 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 SNAPC2Q13487 334 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 PKN2Q16513 984 aaKnown RBP16.85■□□□□ 0.29
SCAF1-203ENST00000598359 ADGRA1Q86SQ6 560 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 AACSQ86V21 672 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 TEX11Q8IYF3 940 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.85■□□□□ 0.29
SCAF1-203ENST00000598359 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
SCAF1-203ENST00000598359 PPATQ06203 517 aa16.84■□□□□ 0.29
SCAF1-203ENST00000598359 HABP4Q5JVS0 413 aaKnown RBP16.84■□□□□ 0.29
SCAF1-203ENST00000598359 NOL9Q5SY16 702 aaKnown RBP16.84■□□□□ 0.29
SCAF1-203ENST00000598359 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-203ENST00000598359 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
SCAF1-203ENST00000598359 AATFQ9NY61 560 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCAF1-203ENST00000598359 TRIM17Q9Y577 477 aa16.84■□□□□ 0.29
SCAF1-203ENST00000598359 MAST2Q6P0Q8 1798 aa16.83■□□□□ 0.28
SCAF1-203ENST00000598359 OTOP1Q7RTM1 612 aa16.83■□□□□ 0.28
SCAF1-203ENST00000598359 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
SCAF1-203ENST00000598359 ERC1Q8IUD2 1116 aa16.83■□□□□ 0.28
SCAF1-203ENST00000598359 RHPN1Q8TCX5 695 aa16.83■□□□□ 0.28
SCAF1-203ENST00000598359 ZFYVE28Q9HCC9 887 aa16.83■□□□□ 0.28
SCAF1-203ENST00000598359 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
SCAF1-203ENST00000598359 SP3Q02447 781 aa16.82■□□□□ 0.28
SCAF1-203ENST00000598359 FBXO46Q6PJ61 603 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-203ENST00000598359 RPAP2Q8IXW5 612 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-203ENST00000598359 SCYL3Q8IZE3 742 aa16.82■□□□□ 0.28
SCAF1-203ENST00000598359 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
SCAF1-203ENST00000598359 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
SCAF1-203ENST00000598359 IDH1O75874 414 aaKnown RBP16.81■□□□□ 0.28
SCAF1-203ENST00000598359 ECM2O94769 699 aaPredicted RBP16.81■□□□□ 0.28
SCAF1-203ENST00000598359 DYNLL1P63167 89 aaKnown RBP16.81■□□□□ 0.28
SCAF1-203ENST00000598359 MAP3K10Q02779 954 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 MOGSQ13724 837 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 MAPKAPK5Q8IW41 473 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 ERO1AQ96HE7 468 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 NOL10Q9BSC4 688 aaKnown RBP16.81■□□□□ 0.28
SCAF1-203ENST00000598359 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 KCNH4Q9UQ05 1017 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 ZHX2Q9Y6X8 837 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 CENPFP49454 3210 aa16.81■□□□□ 0.28
SCAF1-203ENST00000598359 PTPRAP18433 802 aa16.8■□□□□ 0.28
SCAF1-203ENST00000598359 CYP7A1P22680 504 aa16.8■□□□□ 0.28
SCAF1-203ENST00000598359 HSP90AB4PQ58FF6 505 aa16.8■□□□□ 0.28
SCAF1-203ENST00000598359 TGFBRAP1Q8WUH2 860 aa16.8■□□□□ 0.28
SCAF1-203ENST00000598359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.282e-7■■■■□ 26.6
SCAF1-203ENST00000598359 PDHXO00330 501 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 HMMRO75330 724 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
SCAF1-203ENST00000598359 BAG3O95817 575 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 MAP4K4O95819 1239 aaPredicted RBP16.79■□□□□ 0.28
SCAF1-203ENST00000598359 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
SCAF1-203ENST00000598359 SLC4A8Q2Y0W8 1093 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 MIGA1Q8NAN2 632 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 ARHGAP39Q9C0H5 1083 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 HTTP42858 3142 aa16.79■□□□□ 0.28
SCAF1-203ENST00000598359 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 TLR2O60603 784 aa16.78■□□□□ 0.28
SCAF1-203ENST00000598359 CTNND1O60716 968 aaKnown RBP16.78■□□□□ 0.28
SCAF1-203ENST00000598359 PPP4CP60510 307 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms