RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 NOM1Q5C9Z4 860 aaKnown RBP20.34■□□□□ 0.85
USHBP1-208ENST00000598309 MIGA2Q7L4E1 593 aa20.34■□□□□ 0.85
USHBP1-208ENST00000598309 IFNL1Q8IU54 200 aa20.34■□□□□ 0.85
USHBP1-208ENST00000598309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.34■□□□□ 0.85
USHBP1-208ENST00000598309 DDX4Q9NQI0 724 aaKnown RBP20.34■□□□□ 0.85
USHBP1-208ENST00000598309 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.34■□□□□ 0.85
USHBP1-208ENST00000598309 BAG3O95817 575 aa20.33■□□□□ 0.85
USHBP1-208ENST00000598309 PLCG2P16885 1265 aa20.33■□□□□ 0.85
USHBP1-208ENST00000598309 PPP4CP60510 307 aa20.33■□□□□ 0.85
USHBP1-208ENST00000598309 ERO1BQ86YB8 467 aa20.33■□□□□ 0.85
USHBP1-208ENST00000598309 DOCK2Q92608 1830 aa20.32■□□□□ 0.84
USHBP1-208ENST00000598309 MAP3K10Q02779 954 aa20.32■□□□□ 0.84
USHBP1-208ENST00000598309 PICALMQ13492 652 aa20.32■□□□□ 0.84
USHBP1-208ENST00000598309 NOL9Q5SY16 702 aaKnown RBP20.32■□□□□ 0.84
USHBP1-208ENST00000598309 OTUD7BQ6GQQ9 843 aa20.32■□□□□ 0.84
USHBP1-208ENST00000598309 SH3BP5LQ7L8J4 393 aa20.32■□□□□ 0.84
USHBP1-208ENST00000598309 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
USHBP1-208ENST00000598309 ZKSCAN4Q969J2 545 aaPredicted RBP20.32■□□□□ 0.84
USHBP1-208ENST00000598309 GTF2A2P52657 109 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 TEX11Q8IYF3 940 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 OTUD5Q96G74 571 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 MS4A4AQ96JQ5 239 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 LRRCC1Q9C099 1032 aa20.31■□□□□ 0.84
USHBP1-208ENST00000598309 DDTLA6NHG4 134 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 IGF2BP3O00425 579 aaKnown RBP eCLIP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 IDH1O75874 414 aaKnown RBP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 INPP5BP32019 993 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 MAP3K12Q12852 859 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 PPIL2Q13356 520 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 TTF1Q15361 905 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 ADGRA1Q86SQ6 560 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 CERS3Q8IU89 383 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 OSBPL5Q9H0X9 879 aaPredicted RBP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 AATFQ9NY61 560 aaKnown RBP eCLIP20.3■□□□□ 0.84
USHBP1-208ENST00000598309 CASP8AP2Q9UKL3 1982 aa20.3■□□□□ 0.84
USHBP1-208ENST00000598309 TBC1D8O95759 1140 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 PPATQ06203 517 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 SH3RF3Q8TEJ3 882 aaPredicted RBP20.29■□□□□ 0.84
USHBP1-208ENST00000598309 ANTXR1Q9H6X2 564 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 DCTPP1Q9H773 170 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 NDUFB9Q9Y6M9 179 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 AK9Q5TCS8 1911 aa20.29■□□□□ 0.84
USHBP1-208ENST00000598309 PHF20L1A8MW92 1017 aa20.28■□□□□ 0.84
USHBP1-208ENST00000598309 TBC1D12O60347 775 aa20.28■□□□□ 0.84
USHBP1-208ENST00000598309 CYP7A1P22680 504 aa20.28■□□□□ 0.84
USHBP1-208ENST00000598309 BRI3BPQ8WY22 251 aa20.28■□□□□ 0.84
USHBP1-208ENST00000598309 PTPN18Q99952 460 aa20.28■□□□□ 0.84
USHBP1-208ENST00000598309 CCL15-CCL14A0A0B4J2E2 113 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 GPR25O00155 361 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 IRF6O14896 467 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 CETPP11597 493 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 SNAPC2Q13487 334 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 CCL15Q16663 113 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 MAGEB6Q8N7X4 407 aa20.27■□□□□ 0.84
USHBP1-208ENST00000598309 MYO5AQ9Y4I1 1855 aaKnown RBP20.26■□□□□ 0.83
USHBP1-208ENST00000598309 ATP5JP18859 108 aa20.26■□□□□ 0.83
USHBP1-208ENST00000598309 SCYL3Q8IZE3 742 aa20.26■□□□□ 0.83
USHBP1-208ENST00000598309 ZNF296Q8WUU4 475 aaPredicted RBP20.26■□□□□ 0.83
USHBP1-208ENST00000598309 DHX36Q9H2U1 1008 aaKnown RBP20.26■□□□□ 0.83
USHBP1-208ENST00000598309 PCDHB15Q9Y5E8 787 aa20.26■□□□□ 0.83
USHBP1-208ENST00000598309 FLT1P17948 1338 aa20.26■□□□□ 0.83
USHBP1-208ENST00000598309 DGKZQ13574 1117 aa20.25■□□□□ 0.83
USHBP1-208ENST00000598309 ABHD8Q96I13 439 aa20.25■□□□□ 0.83
USHBP1-208ENST00000598309 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
USHBP1-208ENST00000598309 MCOLN1Q9GZU1 580 aa20.25■□□□□ 0.83
USHBP1-208ENST00000598309 ZCCHC17Q9NP64 241 aaKnown RBP20.25■□□□□ 0.83
USHBP1-208ENST00000598309 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
USHBP1-208ENST00000598309 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
USHBP1-208ENST00000598309 CTU1Q7Z7A3 348 aaKnown RBP20.24■□□□□ 0.83
USHBP1-208ENST00000598309 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
USHBP1-208ENST00000598309 CRBNQ96SW2 442 aa20.24■□□□□ 0.83
USHBP1-208ENST00000598309 R3HDMLQ9H3Y0 253 aa20.24■□□□□ 0.83
USHBP1-208ENST00000598309 PICK1Q9NRD5 415 aa20.24■□□□□ 0.83
USHBP1-208ENST00000598309 PI4KBQ9UBF8 816 aa20.24■□□□□ 0.83
USHBP1-208ENST00000598309 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
USHBP1-208ENST00000598309 GOLIM4O00461 696 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 FKTNO75072 461 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 PDE6AP16499 860 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 CRHR2Q13324 411 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 MIGA1Q8NAN2 632 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 HAUS7Q99871 368 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 PAG1Q9NWQ8 432 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 FOCADQ5VW36 1801 aa20.23■□□□□ 0.83
USHBP1-208ENST00000598309 SMARCA5O60264 1052 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-208ENST00000598309 DYNLL1P63167 89 aaKnown RBP20.22■□□□□ 0.83
USHBP1-208ENST00000598309 AAMPQ13685 434 aa20.22■□□□□ 0.83
USHBP1-208ENST00000598309 SLC9C2Q5TAH2 1124 aa20.22■□□□□ 0.83
USHBP1-208ENST00000598309 MAPKAPK5Q8IW41 473 aa20.22■□□□□ 0.83
USHBP1-208ENST00000598309 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
USHBP1-208ENST00000598309 BOLA2Q9H3K6 86 aa20.22■□□□□ 0.83
USHBP1-208ENST00000598309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
USHBP1-208ENST00000598309 CXCL11O14625 94 aa20.21■□□□□ 0.83
USHBP1-208ENST00000598309 PTPRAP18433 802 aa20.21■□□□□ 0.83
USHBP1-208ENST00000598309 METTL16Q86W50 562 aaKnown RBP20.21■□□□□ 0.83
USHBP1-208ENST00000598309 RIOK1Q9BRS2 568 aaKnown RBP20.21■□□□□ 0.83
USHBP1-208ENST00000598309 ECHDC1Q9NTX5 307 aa20.21■□□□□ 0.83
USHBP1-208ENST00000598309 DOCK1Q14185 1865 aa20.21■□□□□ 0.83
USHBP1-208ENST00000598309 CDK5RAP2Q96SN8 1893 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms