RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 FASTKD5Q7L8L6 764 aaKnown RBP20.54■□□□□ 0.88
C19orf54-207ENST00000597507 USP40Q9NVE5 1235 aa20.54■□□□□ 0.88
C19orf54-207ENST00000597507 AFG3L2Q9Y4W6 797 aa20.54■□□□□ 0.88
C19orf54-207ENST00000597507 UNC80Q8N2C7 3258 aa20.53■□□□□ 0.88
C19orf54-207ENST00000597507 TNPO2O14787 897 aaKnown RBP20.53■□□□□ 0.88
C19orf54-207ENST00000597507 PTPRAP18433 802 aa20.53■□□□□ 0.88
C19orf54-207ENST00000597507 PUM3Q15397 648 aaKnown RBP20.53■□□□□ 0.88
C19orf54-207ENST00000597507 DIS3LQ8TF46 1054 aaKnown RBP20.53■□□□□ 0.88
C19orf54-207ENST00000597507 GDF15Q99988 308 aa20.53■□□□□ 0.88
C19orf54-207ENST00000597507 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
C19orf54-207ENST00000597507 SLURP2P0DP57 97 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 CAPN2P17655 700 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 PRDX5P30044 214 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 MNX1P50219 401 aaPredicted RBP20.52■□□□□ 0.88
C19orf54-207ENST00000597507 GADL1Q6ZQY3 521 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 SCYL3Q8IZE3 742 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 PHIPQ8WWQ0 1821 aa20.52■□□□□ 0.88
C19orf54-207ENST00000597507 BMP8BP34820 402 aa20.51■□□□□ 0.87
C19orf54-207ENST00000597507 NECAB2Q7Z6G3 386 aa20.51■□□□□ 0.87
C19orf54-207ENST00000597507 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
C19orf54-207ENST00000597507 SLC45A1Q9Y2W3 748 aa20.51■□□□□ 0.87
C19orf54-207ENST00000597507 DOCK2Q92608 1830 aa20.5■□□□□ 0.87
C19orf54-207ENST00000597507 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
C19orf54-207ENST00000597507 Q7L0L9 218 aa20.5■□□□□ 0.87
C19orf54-207ENST00000597507 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
C19orf54-207ENST00000597507 PICK1Q9NRD5 415 aa20.5■□□□□ 0.87
C19orf54-207ENST00000597507 MYH2Q9UKX2 1941 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 SLC5A1P13866 664 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 RGS3P49796 1198 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 C7orf61Q8IZ16 206 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 ANKRD13CQ8N6S4 541 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 SMCR8Q8TEV9 937 aaPredicted RBP20.49■□□□□ 0.87
C19orf54-207ENST00000597507 LPIN2Q92539 896 aa20.49■□□□□ 0.87
C19orf54-207ENST00000597507 ZMYND8Q9ULU4 1186 aaPredicted RBP20.49■□□□□ 0.87
C19orf54-207ENST00000597507 MAP3K10Q02779 954 aa20.48■□□□□ 0.87
C19orf54-207ENST00000597507 GPR153Q6NV75 609 aa20.48■□□□□ 0.87
C19orf54-207ENST00000597507 CCDC84Q86UT8 332 aaPredicted RBP20.48■□□□□ 0.87
C19orf54-207ENST00000597507 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.48■□□□□ 0.875e-6■■□□□ 12
C19orf54-207ENST00000597507 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.48■□□□□ 0.87
C19orf54-207ENST00000597507 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
C19orf54-207ENST00000597507 EYA2O00167 538 aa20.47■□□□□ 0.87
C19orf54-207ENST00000597507 LDHBP07195 334 aaKnown RBP20.47■□□□□ 0.87
C19orf54-207ENST00000597507 RFX5P48382 616 aaPredicted RBP20.47■□□□□ 0.87
C19orf54-207ENST00000597507 COA7Q96BR5 231 aa20.47■□□□□ 0.87
C19orf54-207ENST00000597507 IDI2Q9BXS1 227 aa20.47■□□□□ 0.87
C19orf54-207ENST00000597507 DOCK1Q14185 1865 aa20.46■□□□□ 0.87
C19orf54-207ENST00000597507 DDTLA6NHG4 134 aaPredicted RBP20.46■□□□□ 0.87
C19orf54-207ENST00000597507 ENTPD3O75355 529 aa20.46■□□□□ 0.87
C19orf54-207ENST00000597507 TREML2Q5T2D2 321 aa20.46■□□□□ 0.87
C19orf54-207ENST00000597507 ATG9AQ7Z3C6 839 aa20.46■□□□□ 0.87
C19orf54-207ENST00000597507 USP44Q9H0E7 712 aa20.46■□□□□ 0.87
C19orf54-207ENST00000597507 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
C19orf54-207ENST00000597507 SYN1P17600 705 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 TRIM32Q13049 653 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 LRIT3Q3SXY7 679 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 STXBP5LQ9Y2K9 1186 aa20.45■□□□□ 0.86
C19orf54-207ENST00000597507 LAMA2P24043 3122 aaKnown RBP20.44■□□□□ 0.86
C19orf54-207ENST00000597507 CTNND1O60716 968 aaKnown RBP20.44■□□□□ 0.86
C19orf54-207ENST00000597507 ZSCAN29Q8IWY8 852 aaPredicted RBP20.44■□□□□ 0.86
C19orf54-207ENST00000597507 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
C19orf54-207ENST00000597507 GJD2Q9UKL4 321 aa20.44■□□□□ 0.86
C19orf54-207ENST00000597507 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
C19orf54-207ENST00000597507 MAGEA10P43363 369 aaPredicted RBP20.43■□□□□ 0.86
C19orf54-207ENST00000597507 FAM110CQ1W6H9 321 aa20.43■□□□□ 0.86
C19orf54-207ENST00000597507 NBPF3Q9H094 633 aa20.43■□□□□ 0.86
C19orf54-207ENST00000597507 RFX7Q2KHR2 1363 aa20.43■□□□□ 0.86
C19orf54-207ENST00000597507 DDX60LQ5H9U9 1706 aaKnown RBP20.42■□□□□ 0.86
C19orf54-207ENST00000597507 HMGCRP04035 888 aa20.42■□□□□ 0.86
C19orf54-207ENST00000597507 MRPL50Q8N5N7 158 aaKnown RBP20.42■□□□□ 0.86
C19orf54-207ENST00000597507 GAKO14976 1311 aa20.42■□□□□ 0.86
C19orf54-207ENST00000597507 RPTORQ8N122 1335 aa20.42■□□□□ 0.86
C19orf54-207ENST00000597507 PLXNB2O15031 1838 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 PHKA1P46020 1223 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 TDHQ8IZJ6 230 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 C11orf49Q9H6J7 331 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 HMX1Q9NP08 348 aaPredicted RBP20.41■□□□□ 0.86
C19orf54-207ENST00000597507 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
C19orf54-207ENST00000597507 DENND2AQ9ULE3 1009 aa20.41■□□□□ 0.86
C19orf54-207ENST00000597507 PICALMQ13492 652 aa20.4■□□□□ 0.86
C19orf54-207ENST00000597507 MRS2Q9HD23 443 aa20.4■□□□□ 0.86
C19orf54-207ENST00000597507 VCANP13611 3396 aa20.39■□□□□ 0.86
C19orf54-207ENST00000597507 FAM196BA6NMK8 535 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 SPP2Q13103 211 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 COL25A1Q9BXS0 654 aaPredicted RBP20.39■□□□□ 0.85
C19orf54-207ENST00000597507 SIL1Q9H173 461 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 PNMA3Q9UL41 463 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 OGDHLQ9ULD0 1010 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 DNAH12Q6ZR08 3092 aa20.39■□□□□ 0.85
C19orf54-207ENST00000597507 SEMA3EO15041 775 aa20.38■□□□□ 0.85
C19orf54-207ENST00000597507 GCLCP48506 637 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-207ENST00000597507 PROCA1Q8NCQ7 364 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-207ENST00000597507 FAM163AQ96GL9 167 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-207ENST00000597507 UBE2OQ9C0C9 1292 aaKnown RBP20.38■□□□□ 0.85
C19orf54-207ENST00000597507 CEP126Q9P2H0 1117 aa20.38■□□□□ 0.85
C19orf54-207ENST00000597507 LOC285556D6RIA3 1793 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms