RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ARMT1Q9H993 441 aa23.27■■□□□ 1.32
PNKP-207ENST00000596014 AIDAQ96BJ3 306 aa23.26■■□□□ 1.31
PNKP-207ENST00000596014 RPAP1Q9BWH6 1393 aaPredicted RBP23.26■■□□□ 1.31
PNKP-207ENST00000596014 SDSP20132 328 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 ZMYM1Q5SVZ6 1142 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 MAPKAPK5Q8IW41 473 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 CRNKL1Q9BZJ0 848 aaKnown RBP23.25■■□□□ 1.31
PNKP-207ENST00000596014 SSC5DA1L4H1 1573 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 SH3BP5LQ7L8J4 393 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 ZSCAN29Q8IWY8 852 aaPredicted RBP23.25■■□□□ 1.31
PNKP-207ENST00000596014 SEC62Q99442 399 aaKnown RBP23.25■■□□□ 1.31
PNKP-207ENST00000596014 OSBPL5Q9H0X9 879 aaPredicted RBP23.25■■□□□ 1.31
PNKP-207ENST00000596014 GBA2Q9HCG7 927 aaPredicted RBP23.25■■□□□ 1.31
PNKP-207ENST00000596014 CREBZFQ9NS37 354 aa23.25■■□□□ 1.31
PNKP-207ENST00000596014 FLT1P17948 1338 aa23.24■■□□□ 1.31
PNKP-207ENST00000596014 USP5P45974 858 aa23.24■■□□□ 1.31
PNKP-207ENST00000596014 C2orf69Q8N8R5 385 aa23.24■■□□□ 1.31
PNKP-207ENST00000596014 DDTLA6NHG4 134 aaPredicted RBP23.23■■□□□ 1.31
PNKP-207ENST00000596014 M0R2C6 588 aa23.23■■□□□ 1.31
PNKP-207ENST00000596014 PRKG1Q13976 671 aa23.23■■□□□ 1.31
PNKP-207ENST00000596014 STRBPQ96SI9 672 aaKnown RBP23.23■■□□□ 1.31
PNKP-207ENST00000596014 MYH1P12882 1939 aa23.23■■□□□ 1.31
PNKP-207ENST00000596014 FKBP1BP68106 108 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 HTRA3P83110 453 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 SDR42E1Q8WUS8 393 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 FZD1Q9UP38 647 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 ATRNL1Q5VV63 1379 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 GPAA1O43292 621 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 PRKAB2O43741 272 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 TTLL12Q14166 644 aaPredicted RBP23.22■■□□□ 1.31
PNKP-207ENST00000596014 MOB2Q70IA6 237 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 SAPCD2Q86UD0 394 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 HOOK2Q96ED9 719 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 FAM227BQ96M60 508 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 CSRNP1Q96S65 589 aa23.22■■□□□ 1.31
PNKP-207ENST00000596014 MKRN1Q9UHC7 482 aaKnown RBP23.22■■□□□ 1.31
PNKP-207ENST00000596014 ABT1Q9ULW3 272 aaKnown RBP23.22■■□□□ 1.31
PNKP-207ENST00000596014 COL2A1P02458 1487 aaPredicted RBP23.21■■□□□ 1.31
PNKP-207ENST00000596014 PAPPA2Q9BXP8 1791 aa23.21■■□□□ 1.31
PNKP-207ENST00000596014 PPP1R12BO60237 982 aaPredicted RBP23.21■■□□□ 1.31
PNKP-207ENST00000596014 HELLSQ9NRZ9 838 aa23.21■■□□□ 1.31
PNKP-207ENST00000596014 TLL2Q9Y6L7 1015 aa23.21■■□□□ 1.31
PNKP-207ENST00000596014 SLC4A4Q9Y6R1 1079 aa23.21■■□□□ 1.31
PNKP-207ENST00000596014 USP2O75604 605 aaPredicted RBP23.2■■□□□ 1.3
PNKP-207ENST00000596014 NMIQ13287 307 aaPredicted RBP23.2■■□□□ 1.3
PNKP-207ENST00000596014 MIGA2Q7L4E1 593 aa23.2■■□□□ 1.3
PNKP-207ENST00000596014 DHX36Q9H2U1 1008 aaKnown RBP23.2■■□□□ 1.3
PNKP-207ENST00000596014 SAP30BPQ9UHR5 308 aaKnown RBP23.2■■□□□ 1.3
PNKP-207ENST00000596014 PALD1Q9ULE6 856 aa23.2■■□□□ 1.3
PNKP-207ENST00000596014 CEP350Q5VT06 3117 aa23.2■■□□□ 1.3
PNKP-207ENST00000596014 A0A0D9SFI3 127 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 ARMC9Q7Z3E5 817 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 DCP1AQ9NPI6 582 aaPredicted RBP23.19■■□□□ 1.3
PNKP-207ENST00000596014 ATP8A2Q9NTI2 1148 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 ANGEL1Q9UNK9 670 aaKnown RBP23.19■■□□□ 1.3
PNKP-207ENST00000596014 BAZ2AQ9UIF9 1905 aaKnown RBP23.19■■□□□ 1.3
PNKP-207ENST00000596014 UBE2Q2LH0YL09 131 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 HIP1O00291 1037 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 HUNKP57058 714 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 DIAPH3Q9NSV4 1193 aa23.19■■□□□ 1.3
PNKP-207ENST00000596014 NAV1Q8NEY1 1877 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 MAP3K11Q16584 847 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 BMP2KLQ5H9B9 411 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 DCAF15Q66K64 600 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 CCDC129Q6ZRS4 1044 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 PI4KBQ9UBF8 816 aa23.18■■□□□ 1.3
PNKP-207ENST00000596014 GNAT2P19087 354 aa23.17■■□□□ 1.3
PNKP-207ENST00000596014 MCM9Q9NXL9 1143 aa23.17■■□□□ 1.3
PNKP-207ENST00000596014 GSG1L2A8MUP6 293 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 MAP3K10Q02779 954 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 CWC27Q6UX04 472 aaKnown RBP23.16■■□□□ 1.3
PNKP-207ENST00000596014 SIPA1L1O43166 1804 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 DDX60LQ5H9U9 1706 aaKnown RBP23.16■■□□□ 1.3
PNKP-207ENST00000596014 SLURP2P0DP57 97 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 IREB2P48200 963 aaKnown RBP23.16■■□□□ 1.3
PNKP-207ENST00000596014 SLC4A8Q2Y0W8 1093 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 LDLRAD1Q5T700 205 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 KLRG1Q96E93 195 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 ZNF341Q9BYN7 854 aa23.16■■□□□ 1.3
PNKP-207ENST00000596014 RASSF10A6NK89 507 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
PNKP-207ENST00000596014 TBC1D12O60347 775 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 DEFB115Q30KQ5 88 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 FOXP4Q8IVH2 680 aaPredicted RBP23.15■■□□□ 1.3
PNKP-207ENST00000596014 DDRGK1Q96HY6 314 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 HHIPL1Q96JK4 782 aa23.15■■□□□ 1.3
PNKP-207ENST00000596014 POLR3DP05423 398 aaPredicted RBP23.14■■□□□ 1.29
PNKP-207ENST00000596014 HLA-DOAP06340 250 aa23.14■■□□□ 1.29
PNKP-207ENST00000596014 CHMLP26374 656 aa23.14■■□□□ 1.29
PNKP-207ENST00000596014 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.29
PNKP-207ENST00000596014 ZNF589Q86UQ0 364 aaPredicted RBP23.14■■□□□ 1.29
PNKP-207ENST00000596014 APPP05067 770 aa23.13■■□□□ 1.29
PNKP-207ENST00000596014 PLCD1P51178 756 aa23.13■■□□□ 1.29
PNKP-207ENST00000596014 METTL16Q86W50 562 aaKnown RBP23.13■■□□□ 1.29
PNKP-207ENST00000596014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■■■■■ 38.3
PNKP-207ENST00000596014 ZNF112Q9UJU3 913 aa23.13■■□□□ 1.29
PNKP-207ENST00000596014 OTOFQ9HC10 1997 aa23.13■■□□□ 1.29
PNKP-207ENST00000596014 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms