RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
ZNF550-207ENST00000595560 SNCAIPQ9Y6H5 919 aa19.27■□□□□ 0.68
ZNF550-207ENST00000595560 SPDYE5A6NIY4 337 aa19.26■□□□□ 0.67
ZNF550-207ENST00000595560 PICALMQ13492 652 aa19.26■□□□□ 0.67
ZNF550-207ENST00000595560 TMED8Q6PL24 325 aaPredicted RBP19.26■□□□□ 0.67
ZNF550-207ENST00000595560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.26■□□□□ 0.67
ZNF550-207ENST00000595560 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
ZNF550-207ENST00000595560 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
ZNF550-207ENST00000595560 ZNF112Q9UJU3 913 aa19.26■□□□□ 0.67
ZNF550-207ENST00000595560 BAG3O95817 575 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 ALDH1A1P00352 501 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 PLCG2P16885 1265 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 SH3BP5LQ7L8J4 393 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 ADGRA1Q86SQ6 560 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 ZKSCAN4Q969J2 545 aaPredicted RBP19.25■□□□□ 0.67
ZNF550-207ENST00000595560 LRRCC1Q9C099 1032 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 NDUFB9Q9Y6M9 179 aa19.25■□□□□ 0.67
ZNF550-207ENST00000595560 TESPA1A2RU30 521 aaPredicted RBP19.24■□□□□ 0.67
ZNF550-207ENST00000595560 DDTLA6NHG4 134 aaPredicted RBP19.24■□□□□ 0.67
ZNF550-207ENST00000595560 IDH1O75874 414 aaKnown RBP19.24■□□□□ 0.67
ZNF550-207ENST00000595560 PPP4CP60510 307 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 ERO1BQ86YB8 467 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
ZNF550-207ENST00000595560 TEX11Q8IYF3 940 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 OTUD5Q96G74 571 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 AATFQ9NY61 560 aaKnown RBP eCLIP19.24■□□□□ 0.67
ZNF550-207ENST00000595560 DOCK1Q14185 1865 aa19.24■□□□□ 0.67
ZNF550-207ENST00000595560 IGF2BP3O00425 579 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZNF550-207ENST00000595560 INPP5BP32019 993 aa19.23■□□□□ 0.67
ZNF550-207ENST00000595560 MAP3K10Q02779 954 aa19.23■□□□□ 0.67
ZNF550-207ENST00000595560 MAP3K12Q12852 859 aa19.23■□□□□ 0.67
ZNF550-207ENST00000595560 TTF1Q15361 905 aaPredicted RBP19.23■□□□□ 0.67
ZNF550-207ENST00000595560 NOM1Q5C9Z4 860 aaKnown RBP19.23■□□□□ 0.67
ZNF550-207ENST00000595560 NOL9Q5SY16 702 aaKnown RBP19.23■□□□□ 0.67
ZNF550-207ENST00000595560 SH3RF3Q8TEJ3 882 aaPredicted RBP19.23■□□□□ 0.67
ZNF550-207ENST00000595560 MS4A4AQ96JQ5 239 aa19.23■□□□□ 0.67
ZNF550-207ENST00000595560 DCTPP1Q9H773 170 aa19.23■□□□□ 0.67
ZNF550-207ENST00000595560 TBC1D8O95759 1140 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 CYP7A1P22680 504 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 GTF2A2P52657 109 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 CERS3Q8IU89 383 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 OSBPL5Q9H0X9 879 aaPredicted RBP19.22■□□□□ 0.67
ZNF550-207ENST00000595560 PCDHB15Q9Y5E8 787 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 SIPA1L1O43166 1804 aa19.22■□□□□ 0.67
ZNF550-207ENST00000595560 MYH7P12883 1935 aa19.21■□□□□ 0.67
ZNF550-207ENST00000595560 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.67
ZNF550-207ENST00000595560 PPIL2Q13356 520 aa19.21■□□□□ 0.67
ZNF550-207ENST00000595560 MAGEB6Q8N7X4 407 aa19.21■□□□□ 0.67
ZNF550-207ENST00000595560 TBC1D12O60347 775 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 ATP5JP18859 108 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 PPATQ06203 517 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 CRBNQ96SW2 442 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 PTPN18Q99952 460 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 ATAD5Q96QE3 1844 aa19.2■□□□□ 0.66
ZNF550-207ENST00000595560 MYH1P12882 1939 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 PHIPQ8WWQ0 1821 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 CCL15-CCL14A0A0B4J2E2 113 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 IRF6O14896 467 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 SMARCA5O60264 1052 aaPredicted RBP19.19■□□□□ 0.66
ZNF550-207ENST00000595560 CCL15Q16663 113 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 DNAJC2Q99543 621 aaKnown RBP19.19■□□□□ 0.66
ZNF550-207ENST00000595560 FLT1P17948 1338 aa19.19■□□□□ 0.66
ZNF550-207ENST00000595560 PTPRFP10586 1907 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 GPR25O00155 361 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 GOLIM4O00461 696 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 CETPP11597 493 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 SNAPC2Q13487 334 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 SCYL3Q8IZE3 742 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 TGFBRAP1Q8WUH2 860 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 ZNF296Q8WUU4 475 aaPredicted RBP19.18■□□□□ 0.66
ZNF550-207ENST00000595560 HAUS7Q99871 368 aa19.18■□□□□ 0.66
ZNF550-207ENST00000595560 DHX36Q9H2U1 1008 aaKnown RBP19.18■□□□□ 0.66
ZNF550-207ENST00000595560 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
ZNF550-207ENST00000595560 CTNND1O60716 968 aaKnown RBP19.17■□□□□ 0.66
ZNF550-207ENST00000595560 DYNLL1P63167 89 aaKnown RBP19.17■□□□□ 0.66
ZNF550-207ENST00000595560 MIGA1Q8NAN2 632 aa19.17■□□□□ 0.66
ZNF550-207ENST00000595560 BOLA2Q9H3K6 86 aa19.17■□□□□ 0.66
ZNF550-207ENST00000595560 R3HDMLQ9H3Y0 253 aa19.17■□□□□ 0.66
ZNF550-207ENST00000595560 PAG1Q9NWQ8 432 aa19.17■□□□□ 0.66
ZNF550-207ENST00000595560 KCNH4Q9UQ05 1017 aa19.17■□□□□ 0.66
ZNF550-207ENST00000595560 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 PDE6AP16499 860 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 DGKZQ13574 1117 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 AAMPQ13685 434 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 SLC9C2Q5TAH2 1124 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 MAPKAPK5Q8IW41 473 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■■■■■ 34
ZNF550-207ENST00000595560 ZCCHC17Q9NP64 241 aaKnown RBP19.16■□□□□ 0.66
ZNF550-207ENST00000595560 PICK1Q9NRD5 415 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 PI4KBQ9UBF8 816 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 HERC5Q9UII4 1024 aaKnown RBP19.16■□□□□ 0.66
ZNF550-207ENST00000595560 NAV1Q8NEY1 1877 aa19.16■□□□□ 0.66
ZNF550-207ENST00000595560 CRHR2Q13324 411 aa19.15■□□□□ 0.66
ZNF550-207ENST00000595560 EDC3Q96F86 508 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms