RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 ATRNL1Q5VV63 1379 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 ANP32CO43423 234 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 SLURP2P0DP57 97 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 BMP8BP34820 402 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 FLT3LGP49771 235 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 DIXDC1Q155Q3 683 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 PAWRQ96IZ0 340 aaKnown RBP12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 DEFB118Q96PH6 123 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 STXBP5LQ9Y2K9 1186 aa12.2□□□□□ -0.46
NOTCH3-202ENST00000595045 PTPRCP08575 1304 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 PHF20L1A8MW92 1017 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 CAPN2P17655 700 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 PRDX5P30044 214 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 SH3BP5LQ7L8J4 393 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 PXYLP1Q8TE99 480 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 DIS3LQ8TF46 1054 aaKnown RBP12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 LPIN2Q92539 896 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 CRISPLD2Q9H0B8 497 aa12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 PAK6Q9NQU5 681 aaPredicted RBP12.19□□□□□ -0.46
NOTCH3-202ENST00000595045 PTPRFP10586 1907 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 CXCL11O14625 94 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 ZBTB22O15209 634 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 IFIT1P09914 478 aaKnown RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 IRF5Q13568 498 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 C7orf61Q8IZ16 206 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 COL25A1Q9BXS0 654 aaPredicted RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 MTMR10Q9NXD2 777 aa12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 ZMYND8Q9ULU4 1186 aaPredicted RBP12.18□□□□□ -0.46
NOTCH3-202ENST00000595045 MAST3O60307 1309 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 MAP3K10Q02779 954 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 TCP10Q12799 353 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 LRIT3Q3SXY7 679 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 NECAB2Q7Z6G3 386 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 WDR66Q8TBY9 1149 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 RFX7Q2KHR2 1363 aa12.17□□□□□ -0.46
NOTCH3-202ENST00000595045 SALL1Q9NSC2 1324 aa12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 A0A0G2JLL6 359 aaPredicted RBP12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 ADORA1P30542 326 aa12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 PHKA1P46020 1223 aa12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 PRRT2Q7Z6L0 340 aaPredicted RBP12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 ZNF384Q8TF68 577 aa12.16□□□□□ -0.46
NOTCH3-202ENST00000595045 MYH13Q9UKX3 1938 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 E9PSI1 815 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 CIAO1O76071 339 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 SLC5A1P13866 664 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 MAGEA10P43363 369 aaPredicted RBP12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 FASTKD5Q7L8L6 764 aaKnown RBP12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 TDHQ8IZJ6 230 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 IDI2Q9BXS1 227 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 MUC3AQ02505 3323 aa12.15□□□□□ -0.46
NOTCH3-202ENST00000595045 GAKO14976 1311 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 SYN1P17600 705 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 SIL1Q9H173 461 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 SLC45A1Q9Y2W3 748 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 DDX60LQ5H9U9 1706 aaKnown RBP12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 PHIPQ8WWQ0 1821 aa12.14□□□□□ -0.47
NOTCH3-202ENST00000595045 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 PTPRAP18433 802 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 RGS3P49796 1198 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 SMCR8Q8TEV9 937 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 COA7Q96BR5 231 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 PICK1Q9NRD5 415 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
NOTCH3-202ENST00000595045 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 RHBDL3P58872 404 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 CCDC102BQ68D86 513 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 SCYL3Q8IZE3 742 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 ANKRD13CQ8N6S4 541 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 COPRSQ9NQ92 184 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms