RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CYP2E1P05181 493 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-204ENST00000594862 IFIT2P09913 472 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-204ENST00000594862 ZSCAN29Q8IWY8 852 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-204ENST00000594862 ZNF384Q8TF68 577 aa21.65■■□□□ 1.06
SHKBP1-204ENST00000594862 SNCAIPQ9Y6H5 919 aa21.65■■□□□ 1.06
SHKBP1-204ENST00000594862 ATRNL1Q5VV63 1379 aa21.64■■□□□ 1.06
SHKBP1-204ENST00000594862 TESPA1A2RU30 521 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 ZAP70P43403 619 aa21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 RHBDL3P58872 404 aa21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 IL1RAPL2Q9NP60 686 aa21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 ZNF112Q9UJU3 913 aa21.64■■□□□ 1.05
SHKBP1-204ENST00000594862 GJA5P36382 358 aa21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 TTF1Q15361 905 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 NOL9Q5SY16 702 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 MIGA2Q7L4E1 593 aa21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 OTUD5Q96G74 571 aa21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 MCOLN1Q9GZU1 580 aa21.63■■□□□ 1.05
SHKBP1-204ENST00000594862 RRP1P56182 461 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-204ENST00000594862 PPATQ06203 517 aa21.62■■□□□ 1.05
SHKBP1-204ENST00000594862 MAP3K12Q12852 859 aa21.62■■□□□ 1.05
SHKBP1-204ENST00000594862 PPIL2Q13356 520 aa21.62■■□□□ 1.05
SHKBP1-204ENST00000594862 PICALMQ13492 652 aa21.62■■□□□ 1.05
SHKBP1-204ENST00000594862 APBB1O00213 710 aa21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 CETPP11597 493 aa21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 PPP4CP60510 307 aa21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 TEX11Q8IYF3 940 aa21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 ZKSCAN4Q969J2 545 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-204ENST00000594862 GPR25O00155 361 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 TNRC18O15417 2968 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 IDH1O75874 414 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 TBC1D8O95759 1140 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 MAP3K10Q02779 954 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 MLLT1Q03111 559 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 SNAPC2Q13487 334 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 DGKZQ13574 1117 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 MS4A4AQ96JQ5 239 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 ZCCHC17Q9NP64 241 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 DDX4Q9NQI0 724 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 PIH1D3Q9NQM4 214 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-204ENST00000594862 CCL15-CCL14A0A0B4J2E2 113 aa21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 IGF2BP3O00425 579 aaKnown RBP eCLIP21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 TBC1D12O60347 775 aa21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 CCL15Q16663 113 aa21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 CTU1Q7Z7A3 348 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 ZFPM1Q8IX07 1006 aa21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 OSBPL5Q9H0X9 879 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 DHX36Q9H2U1 1008 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 AATFQ9NY61 560 aaKnown RBP eCLIP21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 FOCADQ5VW36 1801 aa21.59■■□□□ 1.05
SHKBP1-204ENST00000594862 FKTNO75072 461 aa21.58■■□□□ 1.05
SHKBP1-204ENST00000594862 INPP5BP32019 993 aa21.58■■□□□ 1.05
SHKBP1-204ENST00000594862 PICK1Q9NRD5 415 aa21.58■■□□□ 1.05
SHKBP1-204ENST00000594862 MYO5AQ9Y4I1 1855 aaKnown RBP21.58■■□□□ 1.04
SHKBP1-204ENST00000594862 DDTLA6NHG4 134 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 CYP7A1P22680 504 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 PKN2Q16513 984 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 SH3BP5LQ7L8J4 393 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 SCYL3Q8IZE3 742 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 SH3RF3Q8TEJ3 882 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 ZNF296Q8WUU4 475 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 CNKSR2Q8WXI2 1034 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 BRI3BPQ8WY22 251 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 HERC5Q9UII4 1024 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 DOCK1Q14185 1865 aa21.57■■□□□ 1.04
SHKBP1-204ENST00000594862 IRF6O14896 467 aa21.56■■□□□ 1.04
SHKBP1-204ENST00000594862 PHF20L1A8MW92 1017 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 CTNND1O60716 968 aaKnown RBP21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 MAGEB6Q8N7X4 407 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 DCTPP1Q9H773 170 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 KCNH4Q9UQ05 1017 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 CDK5RAP2Q96SN8 1893 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 PDE4DIPQ5VU43 2346 aa21.55■■□□□ 1.04
SHKBP1-204ENST00000594862 SLC34A2O95436 690 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 ATP5JP18859 108 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 CRHR2Q13324 411 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 ADGRA1Q86SQ6 560 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 GPATCH3Q96I76 525 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 PTPN18Q99952 460 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 ZFYVE28Q9HCC9 887 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 FLT1P17948 1338 aa21.54■■□□□ 1.04
SHKBP1-204ENST00000594862 CXCL11O14625 94 aa21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 AAMPQ13685 434 aa21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 TAF1CQ15572 869 aaPredicted RBP21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 ERO1AQ96HE7 468 aa21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 DNAJC2Q99543 621 aaKnown RBP21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 TBC1D2Q9BYX2 928 aa21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 ANTXR1Q9H6X2 564 aa21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.53■■□□□ 1.04
SHKBP1-204ENST00000594862 HLA-DOAP06340 250 aa21.52■■□□□ 1.04
SHKBP1-204ENST00000594862 TGFBRAP1Q8WUH2 860 aa21.52■■□□□ 1.04
SHKBP1-204ENST00000594862 TRIM34Q9BYJ4 488 aa21.52■■□□□ 1.04
SHKBP1-204ENST00000594862 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.52■■□□□ 1.04
SHKBP1-204ENST00000594862 GOLIM4O00461 696 aa21.51■■□□□ 1.03
SHKBP1-204ENST00000594862 ARHGEF6Q15052 776 aa21.51■■□□□ 1.03
SHKBP1-204ENST00000594862 ANKRD23Q86SG2 305 aa21.51■■□□□ 1.03
SHKBP1-204ENST00000594862 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms