RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 PRKRIP1Q9H875 184 aaPredicted RBP10.71□□□□□ -0.69
SMG9-202ENST00000594081 C9orf78Q9NZ63 289 aaPredicted RBP10.71□□□□□ -0.69
SMG9-202ENST00000594081 SYN1P17600 705 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 LRIT3Q3SXY7 679 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 LRRC24Q50LG9 513 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 GADL1Q6ZQY3 521 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 FASTKD5Q7L8L6 764 aaKnown RBP10.7□□□□□ -0.7
SMG9-202ENST00000594081 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 SMCR8Q8TEV9 937 aaPredicted RBP10.7□□□□□ -0.7
SMG9-202ENST00000594081 KAZALD1Q96I82 304 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 MTMR10Q9NXD2 777 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 SLC45A1Q9Y2W3 748 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 DAGLAQ9Y4D2 1042 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
SMG9-202ENST00000594081 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 VAMP4O75379 141 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 MAGEA10P43363 369 aaPredicted RBP10.69□□□□□ -0.7
SMG9-202ENST00000594081 DIXDC1Q155Q3 683 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 CDC42EP5Q6NZY7 148 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
SMG9-202ENST00000594081 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 FAM198AQ9UFP1 575 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 ZHX2Q9Y6X8 837 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 PLXNB2O15031 1838 aa10.69□□□□□ -0.7
SMG9-202ENST00000594081 RFX7Q2KHR2 1363 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 MAST2Q6P0Q8 1798 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 ALDH1L1O75891 902 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 PDE8BO95263 885 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 HMGCRP04035 888 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 PTPRAP18433 802 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMG9-202ENST00000594081 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 COA7Q96BR5 231 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 SRCIN1Q9C0H9 1055 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 BICC1Q9H694 974 aaKnown RBP10.68□□□□□ -0.7
SMG9-202ENST00000594081 AFG3L2Q9Y4W6 797 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 MYH2Q9UKX2 1941 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 COL2A1P02458 1487 aaPredicted RBP10.68□□□□□ -0.7
SMG9-202ENST00000594081 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
SMG9-202ENST00000594081 TRIM75PA6NK02 468 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 PHF20L1A8MW92 1017 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 NBPF7P0C2Y1 421 aaPredicted RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 PRDX5P30044 214 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 ZEB1P37275 1124 aaPredicted RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 PUM3Q15397 648 aaKnown RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 FAM110CQ1W6H9 321 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 RABL6Q3YEC7 729 aaPredicted RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 SLC4A10Q6U841 1118 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 WDR66Q8TBY9 1149 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 NBPF3Q9H094 633 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.67□□□□□ -0.7
SMG9-202ENST00000594081 AGTPBP1Q9UPW5 1226 aa10.67□□□□□ -0.7
SMG9-202ENST00000594081 UTYO14607 1347 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
SMG9-202ENST00000594081 FGFR2P21802 821 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 TRIM32Q13049 653 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 ZFPM1Q8IX07 1006 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 ANKRD44Q8N8A2 993 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 KLHDC4Q8TBB5 520 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 C11orf49Q9H6J7 331 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 USP40Q9NVE5 1235 aa10.66□□□□□ -0.7
SMG9-202ENST00000594081 PFASO15067 1338 aa10.65□□□□□ -0.7
SMG9-202ENST00000594081 RGS3P49796 1198 aa10.65□□□□□ -0.7
SMG9-202ENST00000594081 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
SMG9-202ENST00000594081 CCDC84Q86UT8 332 aaPredicted RBP10.65□□□□□ -0.7
SMG9-202ENST00000594081 HMX1Q9NP08 348 aaPredicted RBP10.65□□□□□ -0.7
SMG9-202ENST00000594081 PNMA3Q9UL41 463 aa10.65□□□□□ -0.7
SMG9-202ENST00000594081 LTBP2Q14767 1821 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 LDHBP07195 334 aaKnown RBP10.64□□□□□ -0.71
SMG9-202ENST00000594081 SLURP2P0DP57 97 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 SLC5A1P13866 664 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 SH3BP5LQ7L8J4 393 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 ZSCAN29Q8IWY8 852 aaPredicted RBP10.64□□□□□ -0.71
SMG9-202ENST00000594081 TRIB2Q92519 343 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 GUCD1Q96NT3 240 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 LRRFIP2Q9Y608 721 aaKnown RBP10.64□□□□□ -0.71
SMG9-202ENST00000594081 VCANP13611 3396 aa10.64□□□□□ -0.71
SMG9-202ENST00000594081 SALL1Q9NSC2 1324 aa10.63□□□□□ -0.71
SMG9-202ENST00000594081 CTNND1O60716 968 aaKnown RBP10.63□□□□□ -0.71
SMG9-202ENST00000594081 ENTPD3O75355 529 aa10.63□□□□□ -0.71
SMG9-202ENST00000594081 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
SMG9-202ENST00000594081 LPIN2Q92539 896 aa10.63□□□□□ -0.71
SMG9-202ENST00000594081 IDI2Q9BXS1 227 aa10.63□□□□□ -0.71
SMG9-202ENST00000594081 OGDHLQ9ULD0 1010 aa10.63□□□□□ -0.71
SMG9-202ENST00000594081 GAKO14976 1311 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
SMG9-202ENST00000594081 DDTLA6NHG4 134 aaPredicted RBP10.62□□□□□ -0.71
SMG9-202ENST00000594081 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
SMG9-202ENST00000594081 MDM2Q00987 491 aaPredicted RBP10.62□□□□□ -0.71
SMG9-202ENST00000594081 MAP3K10Q02779 954 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 PICALMQ13492 652 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 MAP3K21Q5TCX8 1036 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 FAM161BQ96MY7 647 aa10.62□□□□□ -0.71
SMG9-202ENST00000594081 DDX4Q9NQI0 724 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms