RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GTF2IP78347 998 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 GSTO1P78417 241 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 ALX1Q15699 326 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 KRT26Q7Z3Y9 468 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 ZNF384Q8TF68 577 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
VMP1-217ENST00000593168 JAG2Q9Y219 1238 aa16.05■□□□□ 0.16
VMP1-217ENST00000593168 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 LDHCP07864 332 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
VMP1-217ENST00000593168 KRT32Q14532 448 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 MFSD14BQ5SR56 506 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 ADGRA1Q86SQ6 560 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
VMP1-217ENST00000593168 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
VMP1-217ENST00000593168 TBC1D2Q9BYX2 928 aa16.04■□□□□ 0.16
VMP1-217ENST00000593168 ST18O60284 1047 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 ECE2O60344 883 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 FGAP02671 866 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 FKBP1AP62942 108 aaKnown RBP16.03■□□□□ 0.16
VMP1-217ENST00000593168 RBM26Q5T8P6 1007 aaKnown RBP16.03■□□□□ 0.16
VMP1-217ENST00000593168 C2orf69Q8N8R5 385 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
VMP1-217ENST00000593168 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
VMP1-217ENST00000593168 ZMYM6O95789 1325 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 TRPA1O75762 1119 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 CYP21A2P08686 494 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
VMP1-217ENST00000593168 PSMA5P28066 241 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 ZNF157P51786 506 aaPredicted RBP16.02■□□□□ 0.16
VMP1-217ENST00000593168 NEK4P51957 841 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 GRIK5Q16478 980 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 LCORLQ8N3X6 602 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 DCPSQ96C86 337 aaKnown RBP16.02■□□□□ 0.16
VMP1-217ENST00000593168 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
VMP1-217ENST00000593168 ZSWIM6Q9HCJ5 1215 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 RNF186Q9NXI6 227 aa16.02■□□□□ 0.16
VMP1-217ENST00000593168 PSME4Q14997 1843 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
VMP1-217ENST00000593168 APPP05067 770 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 SOX10P56693 466 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 PPP4CP60510 307 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 IMMTQ16891 758 aaKnown RBP16.01■□□□□ 0.15
VMP1-217ENST00000593168 CERS3Q8IU89 383 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 IFNL3Q8IZI9 196 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 CCDC102AQ96A19 550 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 NACAP1Q9BZK3 213 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
VMP1-217ENST00000593168 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
VMP1-217ENST00000593168 BAG3O95817 575 aa16■□□□□ 0.15
VMP1-217ENST00000593168 SLC10A3P09131 477 aa16■□□□□ 0.15
VMP1-217ENST00000593168 MCM2P49736 904 aa16■□□□□ 0.15
VMP1-217ENST00000593168 KIF4BQ2VIQ3 1234 aa16■□□□□ 0.15
VMP1-217ENST00000593168 GIMAP6Q6P9H5 292 aa16■□□□□ 0.15
VMP1-217ENST00000593168 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
VMP1-217ENST00000593168 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
VMP1-217ENST00000593168 PDE4DIPQ5VU43 2346 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 USP17L3A6NCW0 530 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 USP17L4A6NCW7 530 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 ZNF213O14771 459 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 DYNLL1P63167 89 aaKnown RBP15.99■□□□□ 0.15
VMP1-217ENST00000593168 ADCK5Q3MIX3 580 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 DACT2Q5SW24 774 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 USP17L1Q7RTZ2 530 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 CERS5Q8N5B7 392 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 CSRNP1Q96S65 589 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 UPF3BQ9BZI7 483 aaKnown RBP15.99■□□□□ 0.15
VMP1-217ENST00000593168 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
VMP1-217ENST00000593168 MROH7-TTC4A0A0A0MT08 1334 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 GAKO14976 1311 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 GPR75-ASB3A0A0A6YYF3 556 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 K7ELQ4 463 aaPredicted RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 PRKAB2O43741 272 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 CD2BP2O95400 341 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 VIL1P09327 827 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 HMGB1P09429 215 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 RUFY3Q7L099 469 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 NEK1Q96PY6 1258 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 NOL10Q9BSC4 688 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 CRNKL1Q9BZJ0 848 aaKnown RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 NAPBQ9H115 298 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 EPB41L4AQ9HCS5 686 aaPredicted RBP15.98■□□□□ 0.15
VMP1-217ENST00000593168 AATFQ9NY61 560 aaKnown RBP eCLIP15.98■□□□□ 0.15
VMP1-217ENST00000593168 TAF6LQ9Y6J9 622 aa15.98■□□□□ 0.15
VMP1-217ENST00000593168 HDLBPQ00341 1268 aaKnown RBP15.97■□□□□ 0.15
VMP1-217ENST00000593168 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
VMP1-217ENST00000593168 BLOC1S2Q6QNY1 142 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms