RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 SUPT20HL1Q3ZLR7 823 aa11.99□□□□□ -0.49
TPM4-216ENST00000592822 ZMYM1Q5SVZ6 1142 aa11.99□□□□□ -0.49
TPM4-216ENST00000592822 MAPKAPK5Q8IW41 473 aa11.99□□□□□ -0.49
TPM4-216ENST00000592822 SEC62Q99442 399 aaKnown RBP11.99□□□□□ -0.49
TPM4-216ENST00000592822 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
TPM4-216ENST00000592822 MYH1P12882 1939 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 PAPPA2Q9BXP8 1791 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 ATRNL1Q5VV63 1379 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 FLT1P17948 1338 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 DDTLA6NHG4 134 aaPredicted RBP11.98□□□□□ -0.49
TPM4-216ENST00000592822 M0R2C6 588 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 PRKAB2O43741 272 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 CRNKL1Q9BZJ0 848 aaKnown RBP11.98□□□□□ -0.49
TPM4-216ENST00000592822 OSBPL5Q9H0X9 879 aaPredicted RBP11.98□□□□□ -0.49
TPM4-216ENST00000592822 GBA2Q9HCG7 927 aaPredicted RBP11.98□□□□□ -0.49
TPM4-216ENST00000592822 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 FZD1Q9UP38 647 aa11.98□□□□□ -0.49
TPM4-216ENST00000592822 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 COL2A1P02458 1487 aaPredicted RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 NF2P35240 595 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 USP5P45974 858 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 PRKG1Q13976 671 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 C2orf69Q8N8R5 385 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 AIDAQ96BJ3 306 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 FAM227BQ96M60 508 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 STRBPQ96SI9 672 aaKnown RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
TPM4-216ENST00000592822 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
TPM4-216ENST00000592822 CEP350Q5VT06 3117 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.49
TPM4-216ENST00000592822 A0A0D9SFI3 127 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 GPAA1O43292 621 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 USP2O75604 605 aaPredicted RBP11.96□□□□□ -0.49
TPM4-216ENST00000592822 SLURP2P0DP57 97 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 FKBP1BP68106 108 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
TPM4-216ENST00000592822 MIGA2Q7L4E1 593 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 SAPCD2Q86UD0 394 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 SDR42E1Q8WUS8 393 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 CSRNP1Q96S65 589 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 SLC4A4Q9Y6R1 1079 aa11.96□□□□□ -0.49
TPM4-216ENST00000592822 PPP1R12BO60237 982 aaPredicted RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 HUNKP57058 714 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 ARMC9Q7Z3E5 817 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 HOOK2Q96ED9 719 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 DHX36Q9H2U1 1008 aaKnown RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 DCP1AQ9NPI6 582 aaPredicted RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 HELLSQ9NRZ9 838 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 ATP8A2Q9NTI2 1148 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 ANGEL1Q9UNK9 670 aaKnown RBP11.95□□□□□ -0.5
TPM4-216ENST00000592822 OTOFQ9HC10 1997 aa11.95□□□□□ -0.5
TPM4-216ENST00000592822 RASSF10A6NK89 507 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 GSG1L2A8MUP6 293 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 MAP3K11Q16584 847 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 SLC4A8Q2Y0W8 1093 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 MCMDC2Q4G0Z9 681 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 BMP2KLQ5H9B9 411 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 LDLRAD1Q5T700 205 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 DIAPH3Q9NSV4 1193 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 PI4KBQ9UBF8 816 aa11.94□□□□□ -0.5
TPM4-216ENST00000592822 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 HIP1O00291 1037 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 FOXP2O15409 715 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 TBC1D12O60347 775 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 EVX2Q03828 476 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 CWC27Q6UX04 472 aaKnown RBP11.93□□□□□ -0.5
TPM4-216ENST00000592822 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
TPM4-216ENST00000592822 METTL16Q86W50 562 aaKnown RBP11.93□□□□□ -0.5
TPM4-216ENST00000592822 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.55e-6■■□□□ 11.5
TPM4-216ENST00000592822 KLRG1Q96E93 195 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 HHIPL1Q96JK4 782 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 ZNF341Q9BYN7 854 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 EPB41L4AQ9HCS5 686 aaPredicted RBP11.93□□□□□ -0.5
TPM4-216ENST00000592822 MCM9Q9NXL9 1143 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 ZNF112Q9UJU3 913 aa11.93□□□□□ -0.5
TPM4-216ENST00000592822 PHF20L1A8MW92 1017 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 PATL2C9JE40 543 aaKnown RBP11.92□□□□□ -0.5
TPM4-216ENST00000592822 POLR3DP05423 398 aaPredicted RBP11.92□□□□□ -0.5
TPM4-216ENST00000592822 CYP2D6P10635 497 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 GNAT2P19087 354 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 CHMLP26374 656 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
TPM4-216ENST00000592822 PLCD1P51178 756 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 DEFB115Q30KQ5 88 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 VPS53Q5VIR6 699 aa11.92□□□□□ -0.5
TPM4-216ENST00000592822 GIMAP6Q6P9H5 292 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms