RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ZMYM6O95789 1325 aa4.01□□□□□ -1.77
VMP1-216ENST00000592790 FAM177BA6PVY3 158 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PSMA7O14818 248 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PFKFB1P16118 471 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ATP2B1P20020 1258 aa4□□□□□ -1.77
VMP1-216ENST00000592790 EVA1CP58658 441 aa4□□□□□ -1.77
VMP1-216ENST00000592790 SCRN1Q12765 414 aa4□□□□□ -1.77
VMP1-216ENST00000592790 POSTNQ15063 836 aa4□□□□□ -1.77
VMP1-216ENST00000592790 DNAJC21Q5F1R6 531 aaKnown RBP4□□□□□ -1.77
VMP1-216ENST00000592790 ZMYM1Q5SVZ6 1142 aa4□□□□□ -1.77
VMP1-216ENST00000592790 USPL1Q5W0Q7 1092 aa4□□□□□ -1.77
VMP1-216ENST00000592790 FAM173BQ6P4H8 233 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ZNF790Q6PG37 636 aa4□□□□□ -1.77
VMP1-216ENST00000592790 CCDC91Q7Z6B0 441 aa4□□□□□ -1.77
VMP1-216ENST00000592790 LINC00301Q8NCQ3 95 aa4□□□□□ -1.77
VMP1-216ENST00000592790 NUP133Q8WUM0 1156 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ESR2Q92731 530 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ZNF622Q969S3 477 aaKnown RBP eCLIP4□□□□□ -1.77
VMP1-216ENST00000592790 KCNF1Q9H3M0 494 aa4□□□□□ -1.77
VMP1-216ENST00000592790 SNRKQ9NRH2 765 aa4□□□□□ -1.77
VMP1-216ENST00000592790 VPS18Q9P253 973 aa4□□□□□ -1.77
VMP1-216ENST00000592790 TSKSQ9UJT2 592 aa4□□□□□ -1.77
VMP1-216ENST00000592790 WWC3Q9ULE0 1092 aa4□□□□□ -1.77
VMP1-216ENST00000592790 AK9Q5TCS8 1911 aa4□□□□□ -1.77
VMP1-216ENST00000592790 GOLGA6L10A0A0M3HER8 536 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PDIA3P30101 505 aaKnown RBP4□□□□□ -1.77
VMP1-216ENST00000592790 KRT2P35908 639 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PSEN1P49768 467 aa4□□□□□ -1.77
VMP1-216ENST00000592790 GNAQP50148 359 aa4□□□□□ -1.77
VMP1-216ENST00000592790 APBA1Q02410 837 aa4□□□□□ -1.77
VMP1-216ENST00000592790 MCM6Q14566 821 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ATP2B3Q16720 1220 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ZNF569Q5MCW4 686 aa4□□□□□ -1.77
VMP1-216ENST00000592790 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
VMP1-216ENST00000592790 MICU3Q86XE3 530 aa4□□□□□ -1.77
VMP1-216ENST00000592790 VSTM4Q8IW00 320 aa4□□□□□ -1.77
VMP1-216ENST00000592790 IGSF22Q8N9C0 903 aa4□□□□□ -1.77
VMP1-216ENST00000592790 FAM76AQ8TAV0 307 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PANX2Q96RD6 677 aa4□□□□□ -1.77
VMP1-216ENST00000592790 MTA3Q9BTC8 594 aa4□□□□□ -1.77
VMP1-216ENST00000592790 LRRC2Q9BYS8 371 aa4□□□□□ -1.77
VMP1-216ENST00000592790 CDC23Q9UJX2 597 aa4□□□□□ -1.77
VMP1-216ENST00000592790 SYNRGQ9UMZ2 1314 aa4□□□□□ -1.77
VMP1-216ENST00000592790 WDHD1O75717 1129 aaPredicted RBP4□□□□□ -1.77
VMP1-216ENST00000592790 LARGE1O95461 756 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PNMA6AP0CW24 399 aaPredicted RBP4□□□□□ -1.77
VMP1-216ENST00000592790 IGHMBP2P38935 993 aaKnown RBP4□□□□□ -1.77
VMP1-216ENST00000592790 KIF5AQ12840 1032 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PPFIA1Q13136 1202 aa4□□□□□ -1.77
VMP1-216ENST00000592790 TOB2Q14106 344 aaPredicted RBP4□□□□□ -1.77
VMP1-216ENST00000592790 IQCB1Q15051 598 aa4□□□□□ -1.77
VMP1-216ENST00000592790 SOGA3Q5TF21 947 aa4□□□□□ -1.77
VMP1-216ENST00000592790 FBXO38Q6PIJ6 1188 aa4□□□□□ -1.77
VMP1-216ENST00000592790 C11orf57Q6ZUT1 292 aaPredicted RBP4□□□□□ -1.77
VMP1-216ENST00000592790 NYAP1Q6ZVC0 841 aa4□□□□□ -1.77
VMP1-216ENST00000592790 VPS36Q86VN1 386 aa4□□□□□ -1.77
VMP1-216ENST00000592790 GIMAP7Q8NHV1 300 aa4□□□□□ -1.77
VMP1-216ENST00000592790 ENOX1Q8TC92 643 aaKnown RBP4□□□□□ -1.77
VMP1-216ENST00000592790 TSC1Q92574 1164 aa4□□□□□ -1.77
VMP1-216ENST00000592790 RUBCNQ92622 972 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PSD3Q9NYI0 1048 aa4□□□□□ -1.77
VMP1-216ENST00000592790 NRBP1Q9UHY1 535 aa4□□□□□ -1.77
VMP1-216ENST00000592790 LUC7L2Q9Y383 392 aaKnown RBP4□□□□□ -1.77
VMP1-216ENST00000592790 PRR36Q9H6K5 1346 aa4□□□□□ -1.77
VMP1-216ENST00000592790 PALLDQ8WX93 1383 aa4□□□□□ -1.77
VMP1-216ENST00000592790 MED23Q9ULK4 1368 aa4□□□□□ -1.77
VMP1-216ENST00000592790 CARNS1A5YM72 827 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 ANXA1P04083 346 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 MARCKSP29966 332 aaPredicted RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 ACTN2P35609 894 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 PLCD1P51178 756 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 CLCN6P51797 869 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 RCAN1P53805 252 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 IRX3P78415 501 aaPredicted RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 KLHL10Q6JEL2 608 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 FMNL3Q8IVF7 1028 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 CCDC50Q8IVM0 306 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 DBNDD2Q9BQY9 259 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 C19orf44Q9H6X5 657 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 SLC52A2Q9HAB3 445 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 TCP11L1Q9NUJ3 509 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 NFE2L3Q9Y4A8 694 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 MON2Q7Z3U7 1717 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 ROBO2Q9HCK4 1378 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 HSPD1P10809 573 aaKnown RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 PCP11498 1178 aaKnown RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 ARHGAP25P42331 645 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 NDUFA8P51970 172 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 VAV2P52735 878 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 RBM26Q5T8P6 1007 aaKnown RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 RRAGBQ5VZM2 374 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 KRT40Q6A162 431 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 PROSER2Q86WR7 435 aaPredicted RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 FMR1NBQ8N0W7 255 aaPredicted RBP3.99□□□□□ -1.77
VMP1-216ENST00000592790 ZNF710Q8N1W2 664 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 CHAMP1Q96JM3 812 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 HAUS4Q9H6D7 363 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 L2HGDHQ9H9P8 463 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 LRP2BPQ9P2M1 347 aa3.99□□□□□ -1.77
VMP1-216ENST00000592790 STK36Q9NRP7 1315 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms