RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 NBPF3Q9H094 633 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 ATG3Q9NT62 314 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 DENND2AQ9ULE3 1009 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 NFE2L3Q9Y4A8 694 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 CCDC151A5D8V7 595 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 GPAA1O43292 621 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 ZSCAN26Q16670 478 aa20.59■□□□□ 0.89
SPC24-206ENST00000592540 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
SPC24-206ENST00000592540 MEGF6O75095 1541 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 TRDNQ13061 729 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 SCARF1Q14162 830 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 BRD3Q15059 726 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 EXOC4Q96A65 974 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 XAGE2Q96GT9 111 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 DCAF5Q96JK2 942 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
SPC24-206ENST00000592540 HOOK1Q9UJC3 728 aaKnown RBP20.58■□□□□ 0.89
SPC24-206ENST00000592540 GLI3P10071 1580 aa20.58■□□□□ 0.89
SPC24-206ENST00000592540 NBPF26B4DH59 902 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 SH2B2O14492 632 aaPredicted RBP20.58■□□□□ 0.88
SPC24-206ENST00000592540 GYS2P54840 703 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 NBPF14Q5TI25 921 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 NBPF10Q6P3W6 841 aaKnown RBP20.58■□□□□ 0.88
SPC24-206ENST00000592540 CPLX2Q6PUV4 134 aaKnown RBP20.58■□□□□ 0.88
SPC24-206ENST00000592540 TTLL7Q6ZT98 887 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 NBPF15Q8N660 670 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 KRI1Q8N9T8 703 aaKnown RBP20.58■□□□□ 0.88
SPC24-206ENST00000592540 NKX2-3Q8TAU0 364 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 ENOX1Q8TC92 643 aaKnown RBP20.58■□□□□ 0.88
SPC24-206ENST00000592540 AK7Q96M32 723 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.58■□□□□ 0.88
SPC24-206ENST00000592540 PSD3Q9NYI0 1048 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 ADAM21Q9UKJ8 722 aa20.58■□□□□ 0.88
SPC24-206ENST00000592540 TRPM3Q9HCF6 1732 aaPredicted RBP20.57■□□□□ 0.88
SPC24-206ENST00000592540 MAP2K7O14733 419 aa20.57■□□□□ 0.88
SPC24-206ENST00000592540 ZAP70P43403 619 aa20.57■□□□□ 0.88
SPC24-206ENST00000592540 SPECC1Q5M775 1068 aa20.57■□□□□ 0.88
SPC24-206ENST00000592540 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
SPC24-206ENST00000592540 MLKLQ8NB16 471 aa20.57■□□□□ 0.88
SPC24-206ENST00000592540 H3BQF6 201 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 TRIM29Q14134 588 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 POSTNQ15063 836 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 RAI14Q9P0K7 980 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 ZC3H6P61129 1189 aaKnown RBP20.56■□□□□ 0.88
SPC24-206ENST00000592540 MTF1Q14872 753 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 NT5DC1Q5TFE4 455 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 TRMT44Q8IYL2 757 aaKnown RBP20.56■□□□□ 0.88
SPC24-206ENST00000592540 IRX2Q9BZI1 471 aaPredicted RBP20.56■□□□□ 0.88
SPC24-206ENST00000592540 DACH1Q9UI36 760 aa20.56■□□□□ 0.88
SPC24-206ENST00000592540 MAP3K15Q6ZN16 1313 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 CCDC175P0C221 793 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 IARSP41252 1262 aaKnown RBP20.55■□□□□ 0.88
SPC24-206ENST00000592540 CHMP4BP1P59074 171 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 NR1I3Q14994 352 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 NTRK3Q16288 839 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 SRGAP1Q7Z6B7 1085 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 MICU3Q86XE3 530 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 TBC1D10CQ8IV04 446 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 CYP27B1O15528 508 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 PRR29P0C7W0 189 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 SARSP49591 514 aaKnown RBP20.55■□□□□ 0.88
SPC24-206ENST00000592540 MORC3Q14149 939 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
SPC24-206ENST00000592540 STK11IPQ8N1F8 1099 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 ZSWIM4Q9H7M6 989 aa20.55■□□□□ 0.88
SPC24-206ENST00000592540 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
SPC24-206ENST00000592540 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 GOLGA5Q8TBA6 731 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 MED15Q96RN5 788 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 TRIM34Q9BYJ4 488 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 SAMSN1Q9NSI8 373 aaKnown RBP20.54■□□□□ 0.88
SPC24-206ENST00000592540 UBN2Q6ZU65 1347 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 SOWAHDA6NJG2 315 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 LMAN1P49257 510 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 PI16Q6UXB8 463 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 HNRNPLLQ8WVV9 542 aaKnown RBP20.54■□□□□ 0.88
SPC24-206ENST00000592540 PANX2Q96RD6 677 aa20.54■□□□□ 0.88
SPC24-206ENST00000592540 AKR1B15C9JRZ8 316 aaPredicted RBP20.53■□□□□ 0.88
SPC24-206ENST00000592540 ZBTB43O43298 467 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 CABP4P57796 275 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
SPC24-206ENST00000592540 ANKZF1Q9H8Y5 726 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 LZTFL1Q9NQ48 299 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 CWC15Q9P013 229 aaKnown RBP20.53■□□□□ 0.88
SPC24-206ENST00000592540 SERTAD1Q9UHV2 236 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 A0A1B0GTH6 734 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 UBE2Q2LH0YL09 131 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 POLR2DO15514 142 aaKnown RBP20.53■□□□□ 0.88
SPC24-206ENST00000592540 ADGRG1Q9Y653 693 aa20.53■□□□□ 0.88
SPC24-206ENST00000592540 ABCC12Q96J65 1359 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 AKAP11Q9UKA4 1901 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 GRIN1Q05586 938 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 CCDC57Q2TAC2 916 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 BEND6Q5SZJ8 279 aaPredicted RBP20.52■□□□□ 0.88
SPC24-206ENST00000592540 NOSTRINQ8IVI9 506 aa20.52■□□□□ 0.88
SPC24-206ENST00000592540 TRIML1Q8N9V2 468 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms