RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 RPAP2Q8IXW5 612 aaPredicted RBP17.02■□□□□ 0.32
APOC1-208ENST00000592535 BRI3BPQ8WY22 251 aa17.02■□□□□ 0.32
APOC1-208ENST00000592535 ZNF512BQ96KM6 892 aaPredicted RBP17.02■□□□□ 0.32
APOC1-208ENST00000592535 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.31
APOC1-208ENST00000592535 CCL15-CCL14A0A0B4J2E2 113 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 CYP2E1P05181 493 aaPredicted RBP17.01■□□□□ 0.31
APOC1-208ENST00000592535 ZAP70P43403 619 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 GTF2A2P52657 109 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 CCL15Q16663 113 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 ZSCAN29Q8IWY8 852 aaPredicted RBP17.01■□□□□ 0.31
APOC1-208ENST00000592535 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
APOC1-208ENST00000592535 DDTLA6NHG4 134 aaPredicted RBP17■□□□□ 0.31
APOC1-208ENST00000592535 FKTNO75072 461 aa17■□□□□ 0.31
APOC1-208ENST00000592535 CRHR2Q13324 411 aa17■□□□□ 0.31
APOC1-208ENST00000592535 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
APOC1-208ENST00000592535 AACSQ86V21 672 aa17■□□□□ 0.31
APOC1-208ENST00000592535 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
APOC1-208ENST00000592535 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
APOC1-208ENST00000592535 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 APBB1O00213 710 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 IRF6O14896 467 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 HMMRO75330 724 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 SLURP2P0DP57 97 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 PPIL2Q13356 520 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 NAA16Q6N069 864 aaPredicted RBP16.99■□□□□ 0.31
APOC1-208ENST00000592535 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.99■□□□□ 0.31
APOC1-208ENST00000592535 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
APOC1-208ENST00000592535 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
APOC1-208ENST00000592535 PPATQ06203 517 aa16.98■□□□□ 0.31
APOC1-208ENST00000592535 NOL9Q5SY16 702 aaKnown RBP16.98■□□□□ 0.31
APOC1-208ENST00000592535 FAM43AQ8N2R8 423 aa16.98■□□□□ 0.31
APOC1-208ENST00000592535 PHF20L1A8MW92 1017 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
APOC1-208ENST00000592535 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
APOC1-208ENST00000592535 CETPP11597 493 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 SNAPC2Q13487 334 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 ADGRA1Q86SQ6 560 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
APOC1-208ENST00000592535 KIF1BPQ96EK5 621 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 NOL10Q9BSC4 688 aaKnown RBP16.97■□□□□ 0.31
APOC1-208ENST00000592535 AATFQ9NY61 560 aaKnown RBP eCLIP16.97■□□□□ 0.31
APOC1-208ENST00000592535 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
APOC1-208ENST00000592535 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
APOC1-208ENST00000592535 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
APOC1-208ENST00000592535 ATAD5Q96QE3 1844 aa16.96■□□□□ 0.31
APOC1-208ENST00000592535 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
APOC1-208ENST00000592535 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
APOC1-208ENST00000592535 OSBPL5Q9H0X9 879 aaPredicted RBP16.96■□□□□ 0.31
APOC1-208ENST00000592535 COL2A1P02458 1487 aaPredicted RBP16.96■□□□□ 0.31
APOC1-208ENST00000592535 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
APOC1-208ENST00000592535 BAG3O95817 575 aa16.95■□□□□ 0.3
APOC1-208ENST00000592535 PKN2Q16513 984 aaKnown RBP16.95■□□□□ 0.3
APOC1-208ENST00000592535 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
APOC1-208ENST00000592535 CLASRPQ8N2M8 674 aaKnown RBP16.95■□□□□ 0.3
APOC1-208ENST00000592535 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
APOC1-208ENST00000592535 PTPRFP10586 1907 aa16.95■□□□□ 0.3
APOC1-208ENST00000592535 FAM196BA6NMK8 535 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 IGSF3O75054 1194 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 IDH1O75874 414 aaKnown RBP16.94■□□□□ 0.3
APOC1-208ENST00000592535 PPP4CP60510 307 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 ZFYVE28Q9HCC9 887 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 KCNH4Q9UQ05 1017 aa16.94■□□□□ 0.3
APOC1-208ENST00000592535 TBC1D12O60347 775 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 PLCG2P16885 1265 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 CYP7A1P22680 504 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 DYNLL1P63167 89 aaKnown RBP16.93■□□□□ 0.3
APOC1-208ENST00000592535 CD99L2Q8TCZ2 262 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 MYH1P12882 1939 aa16.93■□□□□ 0.3
APOC1-208ENST00000592535 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 IFIT2P09913 472 aaKnown RBP16.92■□□□□ 0.3
APOC1-208ENST00000592535 PTPRAP18433 802 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 SP3Q02447 781 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 MOGSQ13724 837 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 FBXO46Q6PJ61 603 aaPredicted RBP16.92■□□□□ 0.3
APOC1-208ENST00000592535 MAPKAPK5Q8IW41 473 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 MAGEB6Q8N7X4 407 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.3
APOC1-208ENST00000592535 ZCCHC17Q9NP64 241 aaKnown RBP16.92■□□□□ 0.3
APOC1-208ENST00000592535 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 TRIM17Q9Y577 477 aa16.92■□□□□ 0.3
APOC1-208ENST00000592535 CTNND1O60716 968 aaKnown RBP16.91■□□□□ 0.3
APOC1-208ENST00000592535 CAP1Q01518 475 aa16.91■□□□□ 0.3
APOC1-208ENST00000592535 OTOP1Q7RTM1 612 aa16.91■□□□□ 0.3
APOC1-208ENST00000592535 ANKRD23Q86SG2 305 aa16.91■□□□□ 0.3
APOC1-208ENST00000592535 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.91■□□□□ 0.3
APOC1-208ENST00000592535 ZHX2Q9Y6X8 837 aa16.91■□□□□ 0.3
APOC1-208ENST00000592535 FLT1P17948 1338 aa16.91■□□□□ 0.3
APOC1-208ENST00000592535 CXCL11O14625 94 aa16.9■□□□□ 0.3
APOC1-208ENST00000592535 MAP3K12Q12852 859 aa16.9■□□□□ 0.3
APOC1-208ENST00000592535 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms