RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.22□□□□□ -0.45
BRCA1-227ENST00000591849 ELP3Q9H9T3 547 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 ECHDC1Q9NTX5 307 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 PAG1Q9NWQ8 432 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 PAPPA2Q9BXP8 1791 aa12.22□□□□□ -0.45
BRCA1-227ENST00000591849 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 WDHD1O75717 1129 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-227ENST00000591849 USP5P45974 858 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 IRX6P78412 446 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-227ENST00000591849 SLC9C2Q5TAH2 1124 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 MIGA1Q8NAN2 632 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
BRCA1-227ENST00000591849 MANSC4A6NHS7 340 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-227ENST00000591849 ERC2O15083 957 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 TRPA1O75762 1119 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 RHBDL3P58872 404 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 PPP4CP60510 307 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-227ENST00000591849 VGLL4Q14135 290 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 HAUS7Q99871 368 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
BRCA1-227ENST00000591849 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
BRCA1-227ENST00000591849 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 ZBTB48P10074 688 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 INHBEP58166 350 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 DYNLL1P63167 89 aaKnown RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 MAPKAPK5Q8IW41 473 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 ZKSCAN4Q969J2 545 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 OPTNQ96CV9 577 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 EDC3Q96F86 508 aaKnown RBP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRCA1-227ENST00000591849 PICK1Q9NRD5 415 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 RNF186Q9NXI6 227 aa12.19□□□□□ -0.46
BRCA1-227ENST00000591849 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 DDTLA6NHG4 134 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 HLA-DOAP06340 250 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 PDE6AP16499 860 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 LRRFIP1Q32MZ4 808 aaKnown RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 ADGRA1Q86SQ6 560 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
BRCA1-227ENST00000591849 CRNKL1Q9BZJ0 848 aaKnown RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 OSBPL5Q9H0X9 879 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 DHX36Q9H2U1 1008 aaKnown RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 SAP30BPQ9UHR5 308 aaKnown RBP12.18□□□□□ -0.46
BRCA1-227ENST00000591849 PDE4DIPQ5VU43 2346 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 ALDH1A1P00352 501 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 INPP5BP32019 993 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 TM4SF4P48230 202 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 GTF2A2P52657 109 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 SH3BP5LQ7L8J4 393 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-227ENST00000591849 SAGE1Q9NXZ1 904 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
BRCA1-227ENST00000591849 TTC41PQ6P2S7 1318 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 GLRX3O76003 335 aaKnown RBP12.16□□□□□ -0.46
BRCA1-227ENST00000591849 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-227ENST00000591849 MX1P20591 662 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-227ENST00000591849 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 ZNF112Q9UJU3 913 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 PALD1Q9ULE6 856 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 SNCAIPQ9Y6H5 919 aa12.16□□□□□ -0.46
BRCA1-227ENST00000591849 MYH2Q9UKX2 1941 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 CTNND1O60716 968 aaKnown RBP12.15□□□□□ -0.46
BRCA1-227ENST00000591849 TBC1D8O95759 1140 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 CETPP11597 493 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 ADD2P35612 726 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 GJA5P36382 358 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 PPATQ06203 517 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 SNAPC2Q13487 334 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 CCL15Q16663 113 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 TTC6Q86TZ1 520 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.46
BRCA1-227ENST00000591849 FLT1P17948 1338 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 TBC1D12O60347 775 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 MBD4O95243 580 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 IGHDP01880 384 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 PPIL2Q13356 520 aa12.14□□□□□ -0.47
BRCA1-227ENST00000591849 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms