RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 UBR1Q8IWV7 1749 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 PHLPP2Q6ZVD8 1323 aa13.92□□□□□ -0.18
SMARCA4-217ENST00000591595 MYO1FO00160 1098 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 ETF1P62495 437 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 ENO4A6NNW6 628 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 CDKL5O76039 1030 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 CD151P48509 253 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 CCT5P48643 541 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 MKL1Q969V6 931 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 COPS6Q7L5N1 327 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 HDXQ7Z353 690 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 FAM71BQ8TC56 605 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-217ENST00000591595 TAF5LO75529 589 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 CFAP45Q9UL16 551 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 BLOC1S6Q9UL45 172 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 CACNA1FO60840 1977 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 CHGBP05060 677 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 KIAA1328Q86T90 577 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 UTP14AQ9BVJ6 771 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 NWD1Q149M9 1564 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
SMARCA4-217ENST00000591595 PSDA5PKW4 1024 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 BRD3Q15059 726 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 MYLK4Q86YV6 388 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 ZNF396Q96N95 335 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 NEUROD6Q96NK8 337 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 PICK1Q9NRD5 415 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 GCP02774 474 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 IGKV5-2P06315 115 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 IMPDH2P12268 514 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 CDCA2Q69YH5 1023 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 CCDC73Q6ZRK6 1079 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 CEP112Q8N8E3 955 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 TPD52L2O43399 206 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 GUCY1B3Q02153 619 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 TFCP2Q12800 502 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 UBE3BQ7Z3V4 1068 aa13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 RGPD8O14715 1765 aaPredicted RBP13.89□□□□□ -0.19
SMARCA4-217ENST00000591595 LRRC37A3O60309 1634 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 EPHA10Q5JZY3 1008 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 MFSD4BQ5TF39 518 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 AMOTL1Q8IY63 956 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 RABGGTAQ92696 567 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 ANKARQ7Z5J8 1434 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 PTCD1O75127 700 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 OATP04181 439 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 PYGBP11216 843 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 ACTN3Q08043 901 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 GCKRQ14397 625 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 KCNB1Q14721 858 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 RCSD1Q6JBY9 416 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 RAPGEF4Q8WZA2 1011 aa13.88□□□□□ -0.19
SMARCA4-217ENST00000591595 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 SARM1Q6SZW1 724 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 DBNDD2Q9BQY9 259 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 MYO6Q9UM54 1294 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 ME1P48163 572 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 GSDMDP57764 484 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 MMTAG2Q9BU76 263 aaKnown RBP13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 FTOQ9C0B1 505 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 PARP3Q9Y6F1 533 aa13.87□□□□□ -0.19
SMARCA4-217ENST00000591595 FNTAP49354 379 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 PDIA5Q14554 519 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 RSRC2Q7L4I2 434 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 AFAP1L1Q8TED9 768 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 HOMER3Q9NSC5 361 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 A0A087WWV3 80 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 RTN3O95197 1032 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms