RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SPATA5Q8NB90 893 aa15.01□□□□□ -0.01
SMARCA4-216ENST00000591545 SULF1Q8IWU6 871 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 SREK1Q8WXA9 508 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 DCPSQ96C86 337 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 TTC14Q96N46 770 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 TSNARE1Q96NA8 513 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 DNAJC25Q9H1X3 360 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 ZSWIM4Q9H7M6 989 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 THRAP3Q9Y2W1 955 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 RLBP1P12271 317 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 ARFGAP2Q8N6H7 521 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 TMEM87BQ96K49 555 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 MNAT1P51948 309 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 TCP10Q12799 353 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 CRKLP46109 303 aaKnown RBP15□□□□□ -0.01
SMARCA4-216ENST00000591545 HS2ST1Q7LGA3 356 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 SLC5A4Q9NY91 659 aa15□□□□□ -0.01
SMARCA4-216ENST00000591545 BICDL2A1A5D9 508 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 SLC1A4P43007 532 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 KIF22Q14807 665 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 ISM2Q6H9L7 571 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 KLHDC4Q8TBB5 520 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 SYNCQ9H7C4 482 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 DKC1O60832 514 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 ERVK-7P63135 1459 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 DNM1Q05193 864 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 CHST3Q7LGC8 479 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 ZBTB21Q9ULJ3 1066 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 BCORL1Q5H9F3 1711 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 NEURL1BA8MQ27 555 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 KIF5AQ12840 1032 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 CCDC94Q9BW85 323 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 USP40Q9NVE5 1235 aa14.99□□□□□ -0.01
SMARCA4-216ENST00000591545 MMRN2Q9H8L6 949 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 HECW2Q9P2P5 1572 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 AFMP43652 599 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 APOBRQ0VD83 1088 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 FMNL3Q8IVF7 1028 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 ZBTB38Q8NAP3 1195 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 FBF1Q8TES7 1133 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 TRERF1Q96PN7 1200 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 GPAA1O43292 621 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 PABPC4Q13310 644 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 FCHSD1Q86WN1 690 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 ZKSCAN3Q9BRR0 538 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 ZHX1Q9UKY1 873 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 PRDM15P57071 1507 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 PCCAP05165 728 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 FERP16591 822 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 CCDC129Q6ZRS4 1044 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 ANKS4BQ8N8V4 417 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
SMARCA4-216ENST00000591545 A0A1W2PRG0 241 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 NOP56O00567 594 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 TAF12Q16514 161 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 MAPKAPK5Q8IW41 473 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 IL17REQ8NFR9 667 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 TRIM35Q9UPQ4 493 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 DTHD1Q6ZMT9 781 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 TUBB2AQ13885 445 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 TUBB2BQ9BVA1 445 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 CHMLP26374 656 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 PPP1R2P41236 205 aa14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 ZNF830Q96NB3 372 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 IBTKQ9P2D0 1353 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-216ENST00000591545 B4E1Z4 1266 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 ARHGEF6Q15052 776 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 MCM6Q14566 821 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 PPP1R14CQ8TAE6 165 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 SPC25Q9HBM1 224 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 PTPDC1A2A3K4 754 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 SERPINB2P05120 415 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 NBPF11Q86T75 865 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 TGFBRAP1Q8WUH2 860 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 IQGAP3Q86VI3 1631 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 TTLL7Q6ZT98 887 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 CPXCR1Q8N123 301 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 ASAP1Q9ULH1 1129 aa14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 V9GYY5 206 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-216ENST00000591545 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.02
SMARCA4-216ENST00000591545 NSMFQ6X4W1 530 aa14.96□□□□□ -0.02
SMARCA4-216ENST00000591545 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.02
SMARCA4-216ENST00000591545 EBAG9O00559 213 aa14.95□□□□□ -0.02
SMARCA4-216ENST00000591545 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
SMARCA4-216ENST00000591545 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
SMARCA4-216ENST00000591545 CCDC42Q96M95 316 aa14.95□□□□□ -0.02
SMARCA4-216ENST00000591545 IQCGQ9H095 443 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-216ENST00000591545 OGFRQ9NZT2 677 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms