RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CRKP46108 304 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 CRHR2Q13324 411 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 NBPF11Q86T75 865 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 TEKT1Q969V4 418 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 MRIQ9BWK5 157 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 R3HDMLQ9H3Y0 253 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 ELP3Q9H9T3 547 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 ZFYVE28Q9HCC9 887 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 SUGT1Q9Y2Z0 365 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 PCDHAC2Q9Y5I4 1007 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 PTPRCP08575 1304 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
BRCA1-226ENST00000591534 TCP10L2B9ZVM9 353 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 PDE8BO95263 885 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
BRCA1-226ENST00000591534 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 FBXO33Q7Z6M2 555 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 SUCLG2Q96I99 432 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 UTYO14607 1347 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
BRCA1-226ENST00000591534 CACNA1FO60840 1977 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-226ENST00000591534 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-226ENST00000591534 KIF22Q14807 665 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 RABL6Q3YEC7 729 aaPredicted RBP11.79□□□□□ -0.52
BRCA1-226ENST00000591534 FKBP1CQ5VVH2 108 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 BICC1Q9H694 974 aaKnown RBP11.79□□□□□ -0.52
BRCA1-226ENST00000591534 ZSWIM6Q9HCJ5 1215 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 ZCCHC17Q9NP64 241 aaKnown RBP11.79□□□□□ -0.52
BRCA1-226ENST00000591534 HDAC5Q9UQL6 1122 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
BRCA1-226ENST00000591534 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 CETPP11597 493 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 VGLL4Q14135 290 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
BRCA1-226ENST00000591534 TAF1CQ15572 869 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-226ENST00000591534 CCL15Q16663 113 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 ARMC5Q96C12 935 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 ZDHHC15Q96MV8 337 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 PUS3Q9BZE2 481 aaKnown RBP11.78□□□□□ -0.52
BRCA1-226ENST00000591534 TMEM39BQ9GZU3 492 aa11.78□□□□□ -0.52
BRCA1-226ENST00000591534 GNRH1P01148 92 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 MS4A1P11836 297 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 GJA5P36382 358 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-226ENST00000591534 SNAPC2Q13487 334 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-226ENST00000591534 ERO1BQ86YB8 467 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRCA1-226ENST00000591534 WDR66Q8TBY9 1149 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 PTPN18Q99952 460 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 GNL3LQ9NVN8 582 aaKnown RBP11.77□□□□□ -0.53
BRCA1-226ENST00000591534 PDE4DIPQ5VU43 2346 aa11.77□□□□□ -0.53
BRCA1-226ENST00000591534 SPDYE5A6NIY4 337 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 E9PSI1 815 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 SLC5A1P13866 664 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
BRCA1-226ENST00000591534 MARVELD3Q96A59 401 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
BRCA1-226ENST00000591534 IQSEC3Q9UPP2 1182 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-226ENST00000591534 ZNF646O15015 1829 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-226ENST00000591534 BCAMP50895 628 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 PRMT2P55345 433 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 BRI3BPQ8WY22 251 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 LPIN2Q92539 896 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 AOX1Q06278 1338 aa11.75□□□□□ -0.53
BRCA1-226ENST00000591534 TLR2O60603 784 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 COL9A1P20849 921 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 PPATQ06203 517 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 PPIL2Q13356 520 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 VGLL2Q8N8G2 317 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
BRCA1-226ENST00000591534 EYA2O00167 538 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 HOXD10P28358 340 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 CACNB3P54284 484 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 APOBEC3HQ6NTF7 200 aaKnown RBP11.73□□□□□ -0.53
BRCA1-226ENST00000591534 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 ZNF333Q96JL9 665 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 USP44Q9H0E7 712 aa11.73□□□□□ -0.53
BRCA1-226ENST00000591534 CEP126Q9P2H0 1117 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms