RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	COL6A3	P12111	3177 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	GORAB	Q5T7V8	394 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	FBXO33	Q7Z6M2	555 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	EXOC6	Q8TAG9	804 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	NEUROD6	Q96NK8	337 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	CPA4	Q9UI42	421 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	AK9	Q5TCS8	1911 aa		28.35	■■■□□ 2.13
LSM7-206	ENST00000591515	PSMC4	P43686	418 aa		28.34	■■■□□ 2.13
LSM7-206	ENST00000591515	ADGRA2	Q96PE1	1338 aa		28.34	■■■□□ 2.13
LSM7-206	ENST00000591515	DLL1	O00548	723 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	OSBP	P22059	807 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	GRK4	P32298	578 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	GJA8	P48165	433 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	NKX2-3	Q8TAU0	364 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	PCDHB15	Q9Y5E8	787 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	ALPK3	Q96L96	1907 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	MYH13	Q9UKX3	1938 aa		28.33	■■■□□ 2.13
LSM7-206	ENST00000591515	GJB1	P08034	283 aa		28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	CCL5	P13501	91 aa		28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	TNNI3K	Q59H18	835 aa		28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	CLASRP	Q8N2M8	674 aa	Known RBP	28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	HTATIP2	Q9BUP3	242 aa		28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	FPGT-TNNI3K	V9GXZ4	949 aa		28.32	■■■□□ 2.12
LSM7-206	ENST00000591515	SEMA3E	O15041	775 aa		28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	TIMM10	P62072	90 aa		28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	HDLBP	Q00341	1268 aa	Known RBP	28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	RHPN1	Q8TCX5	695 aa		28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	RAET1E	Q8TD07	263 aa		28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	28.31	■■■□□ 2.12
LSM7-206	ENST00000591515	RPAP1	Q9BWH6	1393 aa	Predicted RBP	28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	MYPN	Q86TC9	1320 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	BCAM	P50895	628 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	SLC17A8	Q8NDX2	589 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	XAGE2	Q96GT9	111 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	RWDD1	Q9H446	243 aa	Predicted RBP	28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	DCTPP1	Q9H773	170 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	CUL9	Q8IWT3	2517 aa		28.3	■■■□□ 2.12
LSM7-206	ENST00000591515	NEFL	P07196	543 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	PPAT	Q06203	517 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	CHAF1A	Q13111	956 aa	Predicted RBP	28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	HDAC1	Q13547	482 aa	Predicted RBP	28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	ANKRD23	Q86SG2	305 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	FAM83A	Q86UY5	434 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	TBC1D22A	Q8WUA7	517 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	TEKT1	Q969V4	418 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	LRRCC1	Q9C099	1032 aa		28.29	■■■□□ 2.12
LSM7-206	ENST00000591515	APBB1	O00213	710 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	ZBTB22	O15209	634 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	FMNL1	O95466	1100 aa	Predicted RBP	28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	HOXD10	P28358	340 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	INPP5B	P32019	993 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	IRX6	P78412	446 aa	Predicted RBP	28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	CCDC158	Q5M9N0	1113 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	RNF208	Q9H0X6	261 aa		28.28	■■■□□ 2.12
LSM7-206	ENST00000591515	PDHX	O00330	501 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	FKBP1C	Q5VVH2	108 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	CCDC102B	Q68D86	513 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	ZDHHC15	Q96MV8	337 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	TMOD2	Q9NZR1	351 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	DENND2A	Q9ULE3	1009 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	NR2E3	Q9Y5X4	410 aa		28.27	■■■□□ 2.12
LSM7-206	ENST00000591515	UQCRFS1P1	P0C7P4	283 aa		28.26	■■■□□ 2.11
LSM7-206	ENST00000591515	DCAF15	Q66K64	600 aa		28.26	■■■□□ 2.11
LSM7-206	ENST00000591515	HOOK2	Q96ED9	719 aa		28.26	■■■□□ 2.11
LSM7-206	ENST00000591515	ZNF341	Q9BYN7	854 aa		28.26	■■■□□ 2.11
LSM7-206	ENST00000591515	KCNH4	Q9UQ05	1017 aa		28.26	■■■□□ 2.11
LSM7-206	ENST00000591515	DOCK3	Q8IZD9	2030 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	SOX1	O00570	391 aa	Predicted RBP	28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	FARP2	O94887	1054 aa	Predicted RBP	28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	ADORA1	P30542	326 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	PRKCZ	Q05513	592 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	MOGS	Q13724	837 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	APOBEC3H	Q6NTF7	200 aa	Known RBP	28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	MIGA2	Q7L4E1	593 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	AACS	Q86V21	672 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	WDR66	Q8TBY9	1149 aa		28.25	■■■□□ 2.11
LSM7-206	ENST00000591515	PTPRF	P10586	1907 aa		28.24	■■■□□ 2.11
LSM7-206	ENST00000591515	IFIT2	P09913	472 aa	Known RBP	28.24	■■■□□ 2.11
LSM7-206	ENST00000591515	U2AF1L4	Q8WU68	220 aa	Known RBP	28.24	■■■□□ 2.11
LSM7-206	ENST00000591515	IL1RAPL2	Q9NP60	686 aa		28.24	■■■□□ 2.11
LSM7-206	ENST00000591515	PHKA1	P46020	1223 aa		28.23	■■■□□ 2.11
LSM7-206	ENST00000591515	UBXN2A	P68543	259 aa		28.23	■■■□□ 2.11
LSM7-206	ENST00000591515	TTC39A	Q5SRH9	613 aa		28.23	■■■□□ 2.11
LSM7-206	ENST00000591515	UNC93B1	Q9H1C4	597 aa		28.23	■■■□□ 2.11
LSM7-206	ENST00000591515	BIN2	Q9UBW5	565 aa	Predicted RBP	28.23	■■■□□ 2.11
LSM7-206	ENST00000591515	ZGPAT	Q8N5A5	531 aa	Known RBP	28.22	■■■□□ 2.11
LSM7-206	ENST00000591515	EAF2	Q96CJ1	260 aa	Predicted RBP	28.22	■■■□□ 2.11
LSM7-206	ENST00000591515	MRI	Q9BWK5	157 aa		28.22	■■■□□ 2.11
LSM7-206	ENST00000591515	PDS5A	Q29RF7	1337 aa	Known RBP	28.21	■■■□□ 2.11
LSM7-206	ENST00000591515		A0A0C4DFX4	3053 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	DOCK2	Q92608	1830 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515		A0A1W2PPC1	479 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	BCR	P11274	1271 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	LRCH3	Q96II8	777 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	DBNDD2	Q9BQY9	259 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	CCDC8	Q9H0W5	538 aa	Predicted RBP	28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	GABRQ	Q9UN88	632 aa		28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	28.21	■■■□□ 2.11
LSM7-206	ENST00000591515	SLAIN1	Q8ND83	568 aa		28.2	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms