RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 CASP7P55210 303 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 LMOD3Q0VAK6 560 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 NEUROD2Q15784 382 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 TEKT1Q969V4 418 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 ZNF576Q9H609 170 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 TMOD2Q9NZR1 351 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 THEGQ9P2T0 379 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 PRKAG2Q9UGJ0 569 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 TRIM35Q9UPQ4 493 aa8.29□□□□□ -1.08
DNMT1-222ENST00000590619 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
DNMT1-222ENST00000590619 XRCC5P13010 732 aaKnown RBP8.28□□□□□ -1.08
DNMT1-222ENST00000590619 RTP1P59025 263 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 TCP10Q12799 353 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 CCDC85BQ15834 202 aaPredicted RBP8.28□□□□□ -1.08
DNMT1-222ENST00000590619 AKNAD1Q5T1N1 836 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 TREML2Q5T2D2 321 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 ZFPM1Q8IX07 1006 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 AGTPBP1Q9UPW5 1226 aa8.28□□□□□ -1.08
DNMT1-222ENST00000590619 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-222ENST00000590619 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-222ENST00000590619 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 EPHB4P54760 987 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 ADGRE1Q14246 886 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 GCKRQ14397 625 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 TMEM31Q5JXX7 168 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 SH3RF1Q7Z6J0 888 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 FBXO33Q7Z6M2 555 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-222ENST00000590619 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-222ENST00000590619 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 IQSEC3Q9UPP2 1182 aaPredicted RBP8.27□□□□□ -1.09
DNMT1-222ENST00000590619 ATP11BQ9Y2G3 1177 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 DNAH12Q6ZR08 3092 aa8.27□□□□□ -1.09
DNMT1-222ENST00000590619 TRIM75PA6NK02 468 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 PEX10O60683 326 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 GPR37L1O60883 481 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 SLURP2P0DP57 97 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 DNAJB2P25686 324 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 ITGB8P26012 769 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 GCLCP48506 637 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-222ENST00000590619 MRE11P49959 708 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 FOXO4P98177 505 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 NEXNQ0ZGT2 675 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 NFIAQ12857 509 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 CHAF1AQ13111 956 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-222ENST00000590619 IFIT5Q13325 482 aaKnown RBP8.26□□□□□ -1.09
DNMT1-222ENST00000590619 UBE4AQ14139 1066 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 CCL14Q16627 93 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 CDC42EP5Q6NZY7 148 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 HHIPL2Q6UWX4 724 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 LDHAL6AQ6ZMR3 332 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
DNMT1-222ENST00000590619 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 USP6NLQ92738 828 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 P2RX7Q99572 595 aaKnown RBP8.26□□□□□ -1.09
DNMT1-222ENST00000590619 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 C11orf16Q9NQ32 467 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 PICK1Q9NRD5 415 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 FAM198AQ9UFP1 575 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 BDP1A6H8Y1 2624 aa8.26□□□□□ -1.09
DNMT1-222ENST00000590619 RPAP1Q9BWH6 1393 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 ZNF853P0CG23 659 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 MAP3K10Q02779 954 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 Q3C1V9 767 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 TRMT44Q8IYL2 757 aaKnown RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 TBC1D22AQ8WUA7 517 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 TIFAQ96CG3 184 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 RNPC3Q96LT9 517 aaKnown RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 GAS2L1Q99501 681 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 PRDM12Q9H4Q4 367 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.25□□□□□ -1.09
DNMT1-222ENST00000590619 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 DAGLAQ9Y4D2 1042 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 MUC6Q6W4X9 2439 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 ARAP2Q8WZ64 1704 aa8.25□□□□□ -1.09
DNMT1-222ENST00000590619 ZKSCAN1P17029 563 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-222ENST00000590619 LPAR1Q92633 364 aa8.24□□□□□ -1.09
DNMT1-222ENST00000590619 KHSRPQ92945 711 aaKnown RBP eCLIP8.24□□□□□ -1.09
DNMT1-222ENST00000590619 ASCC2Q9H1I8 757 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-222ENST00000590619 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
DNMT1-222ENST00000590619 MORF4L1Q9UBU8 362 aa8.24□□□□□ -1.09
DNMT1-222ENST00000590619 SPEF2Q9C093 1822 aa8.24□□□□□ -1.09
DNMT1-222ENST00000590619 TCF20Q9UGU0 1960 aaKnown RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 MYO9BQ13459 2157 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 DNM1LO00429 736 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 CTNND1O60716 968 aaKnown RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 IGFBP4P22692 258 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 PBX2P40425 430 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 TFF2Q03403 129 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 TRIM26Q12899 539 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 SPP2Q13103 211 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 TRIM60Q495X7 471 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 MORN1Q5T089 497 aa8.23□□□□□ -1.09
DNMT1-222ENST00000590619 GJC2Q5T442 439 aaPredicted RBP8.23□□□□□ -1.09
DNMT1-222ENST00000590619 CCDC30Q5VVM6 783 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms