RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 GUCD1Q96NT3 240 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 C9orf78Q9NZ63 289 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 FAM198AQ9UFP1 575 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 DAGLAQ9Y4D2 1042 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 MROH5Q6ZUA9 1318 aa16.11■□□□□ 0.17
NEDD4L-227ENST00000590020 METTL24Q5JXM2 366 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 COA7Q96BR5 231 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 NBPF3Q9H094 633 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 MAST3O60307 1309 aa16.1■□□□□ 0.17
NEDD4L-227ENST00000590020 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 PTPRAP18433 802 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 MDM2Q00987 491 aaPredicted RBP16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 KLHDC4Q8TBB5 520 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 AFG3L2Q9Y4W6 797 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 VCANP13611 3396 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
NEDD4L-227ENST00000590020 PTPRFP10586 1907 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 VAMP4O75379 141 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 TREML2Q5T2D2 321 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 WWC1Q8IX03 1113 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 VGLL2Q8N8G2 317 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 DOCK2Q92608 1830 aa16.08■□□□□ 0.16
NEDD4L-227ENST00000590020 HMGCRP04035 888 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 CAPN2P17655 700 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 HMX1Q9NP08 348 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 SUGT1Q9Y2Z0 365 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 PFASO15067 1338 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 ATRNL1Q5VV63 1379 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 PHIPQ8WWQ0 1821 aa16.07■□□□□ 0.16
NEDD4L-227ENST00000590020 MYH13Q9UKX3 1938 aa16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 PDE8BO95263 885 aa16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 NBPF7P0C2Y1 421 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 PRDX5P30044 214 aa16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 BICC1Q9H694 974 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 SLC45A1Q9Y2W3 748 aa16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 SPTBN5Q9NRC6 3674 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
NEDD4L-227ENST00000590020 EYSQ5T1H1 3165 aa16.05■□□□□ 0.16
NEDD4L-227ENST00000590020 ZEB1P37275 1124 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-227ENST00000590020 SH3BP5LQ7L8J4 393 aa16.05■□□□□ 0.16
NEDD4L-227ENST00000590020 AGTPBP1Q9UPW5 1226 aa16.05■□□□□ 0.16
NEDD4L-227ENST00000590020 DOCK1Q14185 1865 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 RGS3P49796 1198 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 TRIB2Q92519 343 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 OGDHLQ9ULD0 1010 aa16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-227ENST00000590020 PLXNB2O15031 1838 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 PEX10O60683 326 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 CYP2B6P20813 491 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 ANKRD44Q8N8A2 993 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 SRCIN1Q9C0H9 1055 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 PRDM6Q9NQX0 595 aa16.03■□□□□ 0.16
NEDD4L-227ENST00000590020 DDTLA6NHG4 134 aaPredicted RBP16.02■□□□□ 0.16
NEDD4L-227ENST00000590020 ALDH1L1O75891 902 aa16.02■□□□□ 0.16
NEDD4L-227ENST00000590020 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
NEDD4L-227ENST00000590020 FGFR2P21802 821 aa16.02■□□□□ 0.16
NEDD4L-227ENST00000590020 SALL2Q9Y467 1007 aaPredicted RBP16.02■□□□□ 0.16
NEDD4L-227ENST00000590020 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
NEDD4L-227ENST00000590020 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
NEDD4L-227ENST00000590020 PICALMQ13492 652 aa16.01■□□□□ 0.15
NEDD4L-227ENST00000590020 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
NEDD4L-227ENST00000590020 CCDC27Q2M243 656 aa16.01■□□□□ 0.15
NEDD4L-227ENST00000590020 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
NEDD4L-227ENST00000590020 LDHBP07195 334 aaKnown RBP16■□□□□ 0.15
NEDD4L-227ENST00000590020 CDX2Q99626 313 aaPredicted RBP16■□□□□ 0.15
NEDD4L-227ENST00000590020 DDX4Q9NQI0 724 aaKnown RBP16■□□□□ 0.15
NEDD4L-227ENST00000590020 PNMA3Q9UL41 463 aa16■□□□□ 0.15
NEDD4L-227ENST00000590020 IL16Q14005 1332 aa15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 COL2A1P02458 1487 aaPredicted RBP15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 COL6A1P12109 1028 aa15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 HMGCS2P54868 508 aa15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 RABL6Q3YEC7 729 aaPredicted RBP15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 CCDC184Q52MB2 194 aa15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 ZNF697Q5TEC3 545 aa15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 FAM109BQ6ICB4 259 aaPredicted RBP15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 LAMA2P24043 3122 aaKnown RBP15.99■□□□□ 0.15
NEDD4L-227ENST00000590020 KIF16BQ96L93 1317 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 ENTPD3O75355 529 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 SLC5A1P13866 664 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms