RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 DEFB115Q30KQ5 88 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 AIDAQ96BJ3 306 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 TCEANC2Q96MN5 208 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 TM6SF1Q9BZW5 370 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 ZSWIM6Q9HCJ5 1215 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 CDK5RAP2Q96SN8 1893 aa12.12□□□□□ -0.47
APOC1-205ENST00000589781 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
APOC1-205ENST00000589781 PRDX5P30044 214 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 HAND2P61296 217 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 FKBP1AP62942 108 aaKnown RBP12.11□□□□□ -0.47
APOC1-205ENST00000589781 BLOC1S2Q6QNY1 142 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 PRMT6Q96LA8 375 aaPredicted RBP12.11□□□□□ -0.47
APOC1-205ENST00000589781 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
APOC1-205ENST00000589781 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 CYP46A1Q9Y6A2 500 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 MYO3BQ8WXR4 1341 aa12.11□□□□□ -0.47
APOC1-205ENST00000589781 TRPM7Q96QT4 1865 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 AOC2O75106 756 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 LARGE1O95461 756 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 HSPA1AP0DMV8 641 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 HSPA1BP0DMV9 641 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 PSMA5P28066 241 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 MCM2P49736 904 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 KRT32Q14532 448 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 MOB2Q70IA6 237 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 ZNF384Q8TF68 577 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 DCPSQ96C86 337 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 ZNF408Q9H9D4 720 aa12.1□□□□□ -0.47
APOC1-205ENST00000589781 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
APOC1-205ENST00000589781 FAM155AB1AL88 458 aaPredicted RBP12.09□□□□□ -0.47
APOC1-205ENST00000589781 ZBTB22O15209 634 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 PRKAB2O43741 272 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 DDIT3P35638 169 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 DYNLL1P63167 89 aaKnown RBP12.09□□□□□ -0.47
APOC1-205ENST00000589781 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
APOC1-205ENST00000589781 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
APOC1-205ENST00000589781 NSUN4Q96CB9 384 aaKnown RBP12.09□□□□□ -0.47
APOC1-205ENST00000589781 CAPNS2Q96L46 248 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 NEK1Q96PY6 1258 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 SSC5DA1L4H1 1573 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
APOC1-205ENST00000589781 THSD7BQ9C0I4 1608 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 MAGEB6P1A0A0J9YX57 407 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 E7EWF7 191 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 FOXN1O15353 648 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 FGAP02671 866 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 APPP05067 770 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 MECOMQ03112 1051 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
APOC1-205ENST00000589781 CFAP100Q494V2 611 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 MFSD14BQ5SR56 506 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
APOC1-205ENST00000589781 TBC1D10CQ8IV04 446 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
APOC1-205ENST00000589781 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 GBA2Q9HCG7 927 aaPredicted RBP12.08□□□□□ -0.48
APOC1-205ENST00000589781 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 CHMP5Q9NZZ3 219 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 FZD1Q9UP38 647 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
APOC1-205ENST00000589781 ZMYM6O95789 1325 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 PCNTO95613 3336 aa12.08□□□□□ -0.48
APOC1-205ENST00000589781 FOCADQ5VW36 1801 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 CUL4AQ13619 759 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 TOB2Q14106 344 aaPredicted RBP12.07□□□□□ -0.48
APOC1-205ENST00000589781 COL13A1Q5TAT6 717 aaPredicted RBP12.07□□□□□ -0.48
APOC1-205ENST00000589781 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 OGFOD1Q8N543 542 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 NAPBQ9H115 298 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 SLC4A4Q9Y6R1 1079 aa12.07□□□□□ -0.48
APOC1-205ENST00000589781 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
APOC1-205ENST00000589781 TDO2P48775 406 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 NBR1Q14596 966 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
APOC1-205ENST00000589781 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
APOC1-205ENST00000589781 SDR42E1Q8WUS8 393 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms