RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 BHLHE22Q8NFJ8 381 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-207ENST00000589076 KCNB2Q92953 911 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 FAM84AQ96KN4 292 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 ABCB6Q9NP58 842 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 GTF2IRD1Q9UHL9 959 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 GPN3Q9UHW5 284 aaPredicted RBP6.34□□□□□ -1.39
SMAD4-207ENST00000589076 SNX11Q9Y5W9 270 aa6.34□□□□□ -1.39
SMAD4-207ENST00000589076 LRRC10BA6NIK2 292 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 HCLS1P14317 486 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-207ENST00000589076 ZNF157P51786 506 aaPredicted RBP6.33□□□□□ -1.4
SMAD4-207ENST00000589076 FBLN7Q53RD9 439 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.33□□□□□ -1.4
SMAD4-207ENST00000589076 LRRN4CLQ8ND94 238 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 ASB11Q8WXH4 323 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 DUSP23Q9BVJ7 150 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 DISC1Q9NRI5 854 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 TMEM39AQ9NV64 488 aa6.33□□□□□ -1.4
SMAD4-207ENST00000589076 XRCC5P13010 732 aaKnown RBP6.32□□□□□ -1.4
SMAD4-207ENST00000589076 ITIH2P19823 946 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 ORC1Q13415 861 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 KCNMB1Q16558 191 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 PHLDB3Q6NSJ2 640 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 WFDC3Q8IUB2 231 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 WDR89Q96FK6 387 aaPredicted RBP6.32□□□□□ -1.4
SMAD4-207ENST00000589076 EMILIN2Q9BXX0 1053 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 PICK1Q9NRD5 415 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 NLRP2Q9NX02 1062 aa6.32□□□□□ -1.4
SMAD4-207ENST00000589076 ZNF862O60290 1169 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 OXCT1P55809 520 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 IKZF1Q13422 519 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 ZSWIM9Q86XI8 627 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 TOP6BLQ8N6T0 577 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 FLAD1Q8NFF5 587 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 TOX2Q96NM4 488 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 PPP1R16BQ96T49 567 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 ADAMTS6Q9UKP5 1117 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 USTQ9Y2C2 406 aa6.31□□□□□ -1.4
SMAD4-207ENST00000589076 EIF1AYO14602 144 aaKnown RBP6.3□□□□□ -1.4
SMAD4-207ENST00000589076 LEFTY1O75610 366 aa6.3□□□□□ -1.4
SMAD4-207ENST00000589076 CD96P40200 585 aa6.3□□□□□ -1.4
SMAD4-207ENST00000589076 ZSCAN18Q8TBC5 510 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-207ENST00000589076 ACSBG1Q96GR2 724 aa6.3□□□□□ -1.4
SMAD4-207ENST00000589076 FAM129BQ96TA1 746 aa6.3□□□□□ -1.4
SMAD4-207ENST00000589076 GNAT3A8MTJ3 354 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 AFMP43652 599 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 FCGRTP55899 365 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 ERVK-24P63145 666 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 GRM2Q14416 872 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 RNF214Q8ND24 703 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 DMRTB1Q96MA1 342 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 NIF3L1Q9GZT8 377 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 SAMM50Q9Y512 469 aa6.29□□□□□ -1.4
SMAD4-207ENST00000589076 ZP2Q05996 745 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 FAAP100Q0VG06 881 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 MLANAQ16655 118 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 SULF2Q8IWU5 870 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 ISL2Q96A47 359 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 PCDHGC5Q9Y5F6 944 aa6.28□□□□□ -1.4
SMAD4-207ENST00000589076 IGF2BP3O00425 579 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMAD4-207ENST00000589076 ARNTP27540 789 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 MAP1SQ66K74 1059 aaPredicted RBP6.27□□□□□ -1.41
SMAD4-207ENST00000589076 CDC37L1Q7L3B6 337 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 CSRNP1Q96S65 589 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 CBX8Q9HC52 389 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
SMAD4-207ENST00000589076 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 SERPINB4P48594 390 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 ARHGAP4P98171 946 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 TRIM26Q12899 539 aaPredicted RBP6.26□□□□□ -1.41
SMAD4-207ENST00000589076 ZC3H12AQ5D1E8 599 aaKnown RBP6.26□□□□□ -1.41
SMAD4-207ENST00000589076 MPZL3Q6UWV2 235 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 SPOCD1Q6ZMY3 1216 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 KCT2Q8NC54 265 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 PRDM10Q9NQV6 1147 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 AKAP2Q9Y2D5 859 aa6.26□□□□□ -1.41
SMAD4-207ENST00000589076 NEFMP07197 916 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 NME2P22392 152 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 CLCN7P51798 805 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 EPS8L3Q8TE67 593 aaKnown RBP6.25□□□□□ -1.41
SMAD4-207ENST00000589076 CCDC120Q96HB5 630 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 LMCD1Q9NZU5 365 aa6.25□□□□□ -1.41
SMAD4-207ENST00000589076 CARNS1A5YM72 827 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 PATL2C9JE40 543 aaKnown RBP6.24□□□□□ -1.41
SMAD4-207ENST00000589076 BRD1O95696 1058 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 MESP2Q0VG99 397 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 PDZD3Q86UT5 571 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 AEBP1Q8IUX7 1158 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 ALKBH8Q96BT7 664 aaKnown RBP6.24□□□□□ -1.41
SMAD4-207ENST00000589076 FOXQ1Q9C009 403 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 PRDM7Q9NQW5 492 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 PRDM5Q9NQX1 630 aaPredicted RBP6.24□□□□□ -1.41
SMAD4-207ENST00000589076 U3KQE9 123 aa6.24□□□□□ -1.41
SMAD4-207ENST00000589076 GPR182O15218 404 aa6.23□□□□□ -1.41
SMAD4-207ENST00000589076 TSPAN15O95858 294 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms