RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PRKAB2O43741 272 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 PFKFB2O60825 505 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 F13A1P00488 732 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 MMRN1Q13201 1228 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 NLGN1Q8N2Q7 840 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-206ENST00000588860 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 AGXT2Q9BYV1 514 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 LMBRD1Q9NUN5 540 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 MYH8P13535 1937 aa10.33□□□□□ -0.76
SMAD4-206ENST00000588860 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 JAK2O60674 1132 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 PRPF40AO75400 957 aaKnown RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 BBOX1O75936 387 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 UFL1O94874 794 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 YBX3P16989 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 PDCP20941 246 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 HOXA10P31260 410 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 ANTXR2P58335 489 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 CTDSPL2Q05D32 466 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 SCRN1Q12765 414 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 FOXD4L6Q3SYB3 417 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 LARP1BQ659C4 914 aaKnown RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 FOXD4L3Q6VB84 417 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 ZNF804AQ7Z570 1209 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 GGA1Q9UJY5 639 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 JAG2Q9Y219 1238 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 DDX49Q9Y6V7 483 aaKnown RBP10.32□□□□□ -0.76
SMAD4-206ENST00000588860 NEDD4P46934 1319 aa10.32□□□□□ -0.76
SMAD4-206ENST00000588860 SLX4Q8IY92 1834 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 MMP10P09238 476 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 DYNLL1P63167 89 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 CCT2P78371 535 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 MECOMQ03112 1051 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 SPTY2D1Q68D10 685 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 C15orf52Q6ZUT6 534 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 FBXL16Q8N461 479 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 NLGN2Q8NFZ4 835 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 DDX11Q96FC9 970 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 NSFL1CQ9UNZ2 370 aaKnown RBP10.31□□□□□ -0.76
SMAD4-206ENST00000588860 ATP6V1DQ9Y5K8 247 aa10.31□□□□□ -0.76
SMAD4-206ENST00000588860 PTPDC1A2A3K4 754 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 GOLGA8BA8MQT2 603 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 B4E1Z4 1266 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 PDIA4P13667 645 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 KLHL40Q2TBA0 621 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 AKNAD1Q5T1N1 836 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 DZIP1Q86YF9 867 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 FAM184AQ8NB25 1140 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 TDRD7Q8NHU6 1098 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 WDR66Q8TBY9 1149 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 ZNF384Q8TF68 577 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 SDR42E1Q8WUS8 393 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 CHMP4CQ96CF2 233 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 RIOK1Q9BRS2 568 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 CNNM2Q9H8M5 875 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
SMAD4-206ENST00000588860 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
SMAD4-206ENST00000588860 MINDY4BA8MYZ0 360 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 SH2B2O14492 632 aaPredicted RBP10.29□□□□□ -0.76
SMAD4-206ENST00000588860 KIF3CO14782 793 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 CTDNEP1O95476 244 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 LDHBP07195 334 aaKnown RBP10.29□□□□□ -0.76
SMAD4-206ENST00000588860 NPR1P16066 1061 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 POLD1P28340 1107 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 PRDX5P30044 214 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 PDE6BP35913 854 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 FOSBP53539 338 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 EVCP57679 992 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
SMAD4-206ENST00000588860 MFSD6Q6ZSS7 791 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 CDC37L1Q7L3B6 337 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 KRT23Q9C075 422 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 INCENPQ9NQS7 918 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 TOMM22Q9NS69 142 aa10.29□□□□□ -0.76
SMAD4-206ENST00000588860 ANGEL1Q9UNK9 670 aaKnown RBP10.29□□□□□ -0.76
SMAD4-206ENST00000588860 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 248.7 ms