RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 DBNLQ9UJU6 430 aaKnown RBP23.59■■□□□ 1.37
CCDC130-209ENST00000588809 COL2A1P02458 1487 aaPredicted RBP23.59■■□□□ 1.37
CCDC130-209ENST00000588809 LDHCP07864 332 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 INPP5BP32019 993 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 PPIL2Q13356 520 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 TTC39AQ5SRH9 613 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 DDX4Q9NQI0 724 aaKnown RBP23.58■■□□□ 1.37
CCDC130-209ENST00000588809 ZBTB40Q9NUA8 1239 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 SIPA1L1O43166 1804 aa23.58■■□□□ 1.37
CCDC130-209ENST00000588809 CCL15-CCL14A0A0B4J2E2 113 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 IGSF3O75054 1194 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 MAP3K10Q02779 954 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 CRHR2Q13324 411 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 CCL15Q16663 113 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 NOL9Q5SY16 702 aaKnown RBP23.57■■□□□ 1.36
CCDC130-209ENST00000588809 SH3BP5LQ7L8J4 393 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 ERC1Q8IUD2 1116 aa23.57■■□□□ 1.36
CCDC130-209ENST00000588809 EAF2Q96CJ1 260 aaPredicted RBP23.57■■□□□ 1.36
CCDC130-209ENST00000588809 IRF6O14896 467 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 PPATQ06203 517 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 TLR7Q9NYK1 1049 aaKnown RBP23.56■■□□□ 1.36
CCDC130-209ENST00000588809 RAI14Q9P0K7 980 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 LRP2BPQ9P2M1 347 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 EXOC6BQ9Y2D4 811 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 COG6Q9Y2V7 657 aa23.56■■□□□ 1.36
CCDC130-209ENST00000588809 CYP2E1P05181 493 aaPredicted RBP23.55■■□□□ 1.36
CCDC130-209ENST00000588809 CETPP11597 493 aa23.55■■□□□ 1.36
CCDC130-209ENST00000588809 RPAP2Q8IXW5 612 aaPredicted RBP23.55■■□□□ 1.36
CCDC130-209ENST00000588809 ZCCHC17Q9NP64 241 aaKnown RBP23.55■■□□□ 1.36
CCDC130-209ENST00000588809 MYH1P12882 1939 aa23.55■■□□□ 1.36
CCDC130-209ENST00000588809 PHF20L1A8MW92 1017 aa23.54■■□□□ 1.36
CCDC130-209ENST00000588809 RGS19P49795 217 aa23.54■■□□□ 1.36
CCDC130-209ENST00000588809 SNAPC2Q13487 334 aa23.54■■□□□ 1.36
CCDC130-209ENST00000588809 SNRKQ9NRH2 765 aa23.54■■□□□ 1.36
CCDC130-209ENST00000588809 DDTLA6NHG4 134 aaPredicted RBP23.53■■□□□ 1.36
CCDC130-209ENST00000588809 HSP90AB4PQ58FF6 505 aa23.53■■□□□ 1.36
CCDC130-209ENST00000588809 FAM43AQ8N2R8 423 aa23.53■■□□□ 1.36
CCDC130-209ENST00000588809 CCDC8Q9H0W5 538 aaPredicted RBP23.53■■□□□ 1.36
CCDC130-209ENST00000588809 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
CCDC130-209ENST00000588809 BRCA2P51587 3418 aa23.52■■□□□ 1.36
CCDC130-209ENST00000588809 PICALMQ13492 652 aa23.52■■□□□ 1.36
CCDC130-209ENST00000588809 PDE3AQ14432 1141 aa23.52■■□□□ 1.36
CCDC130-209ENST00000588809 ZSCAN29Q8IWY8 852 aaPredicted RBP23.52■■□□□ 1.36
CCDC130-209ENST00000588809 SIRT2Q8IXJ6 389 aa23.52■■□□□ 1.36
CCDC130-209ENST00000588809 KCNH4Q9UQ05 1017 aa23.52■■□□□ 1.36
CCDC130-209ENST00000588809 ZAP70P43403 619 aa23.51■■□□□ 1.35
CCDC130-209ENST00000588809 NAA16Q6N069 864 aaPredicted RBP23.51■■□□□ 1.35
CCDC130-209ENST00000588809 FBXO46Q6PJ61 603 aaPredicted RBP23.51■■□□□ 1.35
CCDC130-209ENST00000588809 HPS5Q9UPZ3 1129 aa23.51■■□□□ 1.35
CCDC130-209ENST00000588809 MYH7P12883 1935 aa23.51■■□□□ 1.35
CCDC130-209ENST00000588809 RBBP6Q7Z6E9 1792 aaKnown RBP23.5■■□□□ 1.35
CCDC130-209ENST00000588809 ZSWIM8A7E2V4 1837 aa23.5■■□□□ 1.35
CCDC130-209ENST00000588809 TBC1D12O60347 775 aa23.5■■□□□ 1.35
CCDC130-209ENST00000588809 HMMRO75330 724 aa23.5■■□□□ 1.35
CCDC130-209ENST00000588809 PPP4CP60510 307 aa23.5■■□□□ 1.35
CCDC130-209ENST00000588809 TAF1CQ15572 869 aaPredicted RBP23.5■■□□□ 1.35
CCDC130-209ENST00000588809 ERO1AQ96HE7 468 aa23.5■■□□□ 1.35
CCDC130-209ENST00000588809 BTBD19C9JJ37 291 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 AACSQ86V21 672 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 SCYL3Q8IZE3 742 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.49■■□□□ 1.35
CCDC130-209ENST00000588809 RHPN1Q8TCX5 695 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 OSBPL5Q9H0X9 879 aaPredicted RBP23.49■■□□□ 1.35
CCDC130-209ENST00000588809 ZFYVE28Q9HCC9 887 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 PIH1D3Q9NQM4 214 aaKnown RBP23.49■■□□□ 1.35
CCDC130-209ENST00000588809 MGAMO43451 1857 aa23.49■■□□□ 1.35
CCDC130-209ENST00000588809 LOC285556D6RIA3 1793 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 PLCG2P16885 1265 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 SP3Q02447 781 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 OTOP1Q7RTM1 612 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 ADGRA1Q86SQ6 560 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 TEX11Q8IYF3 940 aa23.48■■□□□ 1.35
CCDC130-209ENST00000588809 NOL10Q9BSC4 688 aaKnown RBP23.48■■□□□ 1.35
CCDC130-209ENST00000588809 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
CCDC130-209ENST00000588809 CTNND1O60716 968 aaKnown RBP23.47■■□□□ 1.35
CCDC130-209ENST00000588809 BAG3O95817 575 aa23.47■■□□□ 1.35
CCDC130-209ENST00000588809 MOGSQ13724 837 aa23.47■■□□□ 1.35
CCDC130-209ENST00000588809 C20orf194Q5TEA3 1177 aa23.47■■□□□ 1.35
CCDC130-209ENST00000588809 SH3RF3Q8TEJ3 882 aaPredicted RBP23.47■■□□□ 1.35
CCDC130-209ENST00000588809 KIF1BPQ96EK5 621 aa23.47■■□□□ 1.35
CCDC130-209ENST00000588809 AATFQ9NY61 560 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC130-209ENST00000588809 CXCL11O14625 94 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 TLR2O60603 784 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 SLURP2P0DP57 97 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 DDX60LQ5H9U9 1706 aaKnown RBP23.46■■□□□ 1.35
CCDC130-209ENST00000588809 TMED8Q6PL24 325 aaPredicted RBP23.46■■□□□ 1.35
CCDC130-209ENST00000588809 ANKRD23Q86SG2 305 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 CD99L2Q8TCZ2 262 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 IL1RAPL2Q9NP60 686 aa23.46■■□□□ 1.35
CCDC130-209ENST00000588809 MKI67P46013 3256 aaKnown RBP23.45■■□□□ 1.34
CCDC130-209ENST00000588809 PTPRAP18433 802 aa23.45■■□□□ 1.34
CCDC130-209ENST00000588809 PICK1Q9NRD5 415 aa23.45■■□□□ 1.34
CCDC130-209ENST00000588809 TRIM17Q9Y577 477 aa23.45■■□□□ 1.34
CCDC130-209ENST00000588809 RAB11FIP3O75154 756 aa23.44■■□□□ 1.34
CCDC130-209ENST00000588809 CAP1Q01518 475 aa23.44■■□□□ 1.34
CCDC130-209ENST00000588809 CLASRPQ8N2M8 674 aaKnown RBP23.44■■□□□ 1.34
CCDC130-209ENST00000588809 NAV1Q8NEY1 1877 aa23.44■■□□□ 1.34
CCDC130-209ENST00000588809 KIAA0100Q14667 2235 aaKnown RBP23.44■■□□□ 1.34
CCDC130-209ENST00000588809 DHX36Q9H2U1 1008 aaKnown RBP23.43■■□□□ 1.34
CCDC130-209ENST00000588809 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms