RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 MYO1BO43795 1136 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 ALDH1B1P30837 517 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
BCAS3-220ENST00000588720 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 NEFHP12036 1026 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
BCAS3-220ENST00000588720 MYL10Q9BUA6 226 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 DNAJC25Q9H1X3 360 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 MYO6Q9UM54 1294 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 USP17L21D6R901 530 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 GADD45BO75293 160 aaPredicted RBP13.11□□□□□ -0.31
BCAS3-220ENST00000588720 NAPAP54920 295 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 ANO1Q5XXA6 986 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 OTUD7BQ6GQQ9 843 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
BCAS3-220ENST00000588720 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
BCAS3-220ENST00000588720 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 SPATA31A1Q5TZJ5 1347 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 TUBB4AP04350 444 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 PDIA3P30101 505 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 COL15A1P39059 1388 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 AMPD3Q01432 767 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 KRT40Q6A162 431 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 PHKBQ93100 1093 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 RRP36Q96EU6 259 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 PUS7LQ9H0K6 701 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 GSDMDP57764 484 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 FAM193AP78312 1265 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 BSDC1Q9NW68 430 aaPredicted RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 NARFQ9UHQ1 456 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 SAP30BPQ9UHR5 308 aaKnown RBP13.1□□□□□ -0.31
BCAS3-220ENST00000588720 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
BCAS3-220ENST00000588720 JCADQ9P266 1359 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 H0YIN7 160 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 BMS1Q14692 1282 aaKnown RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 KIF2CQ99661 725 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 MED23Q9ULK4 1368 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 ERICH4A6NGS2 130 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 IVLP07476 585 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 GNA11P29992 359 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 MCAMP43121 646 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 SCRN1Q12765 414 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 TRAF1Q13077 416 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 PXDNQ92626 1479 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 PDE6BP35913 854 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 ATG9AQ7Z3C6 839 aa13.09□□□□□ -0.31
BCAS3-220ENST00000588720 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
BCAS3-220ENST00000588720 A0A1B0GVL5 298 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.31
BCAS3-220ENST00000588720 MCM3P25205 808 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 RASGRF1Q13972 1273 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 RBSNQ9H1K0 784 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 XDHP47989 1333 aa13.08□□□□□ -0.31
BCAS3-220ENST00000588720 KCNQ2O43526 872 aa13.08□□□□□ -0.32
BCAS3-220ENST00000588720 NAP1L1P55209 391 aaKnown RBP13.08□□□□□ -0.32
BCAS3-220ENST00000588720 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
BCAS3-220ENST00000588720 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
BCAS3-220ENST00000588720 TRIM37O94972 964 aa13.08□□□□□ -0.32
BCAS3-220ENST00000588720 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
BCAS3-220ENST00000588720 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
BCAS3-220ENST00000588720 MICALCLQ6ZW33 695 aa13.08□□□□□ -0.32
BCAS3-220ENST00000588720 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
BCAS3-220ENST00000588720 ELP1O95163 1332 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 SERPINB2P05120 415 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
BCAS3-220ENST00000588720 CLSTN2Q9H4D0 955 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 YEATS4O95619 227 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 EHMT1Q9H9B1 1298 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 PIH1D3Q9NQM4 214 aaKnown RBP13.07□□□□□ -0.32
BCAS3-220ENST00000588720 RMND1Q9NWS8 449 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 TFAP4Q01664 338 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 VPS72Q15906 364 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 KRT222Q8N1A0 295 aa13.07□□□□□ -0.32
BCAS3-220ENST00000588720 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms