RNA–Protein interactions for RNA: ENST00000588680.1

NFIX-211, Transcript of nuclear factor I X, humanhuman

TSL 5

Gene NFIX, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-211ENST00000588680 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.77□□□□□ -0.85
NFIX-211ENST00000588680 TDHQ8IZJ6 230 aa9.77□□□□□ -0.85
NFIX-211ENST00000588680 SMCR8Q8TEV9 937 aaPredicted RBP9.77□□□□□ -0.85
NFIX-211ENST00000588680 SUCLG2Q96I99 432 aa9.77□□□□□ -0.85
NFIX-211ENST00000588680 DAGLAQ9Y4D2 1042 aa9.77□□□□□ -0.85
NFIX-211ENST00000588680 LTBP2Q14767 1821 aa9.77□□□□□ -0.85
NFIX-211ENST00000588680 CAPN2P17655 700 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 LRRC24Q50LG9 513 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 METTL24Q5JXM2 366 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 CDC42EP5Q6NZY7 148 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 SCYL3Q8IZE3 742 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 VGLL2Q8N8G2 317 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 KAZALD1Q96I82 304 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 MRIQ9BWK5 157 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
NFIX-211ENST00000588680 C9orf78Q9NZ63 289 aaPredicted RBP9.76□□□□□ -0.85
NFIX-211ENST00000588680 SUGT1Q9Y2Z0 365 aa9.76□□□□□ -0.85
NFIX-211ENST00000588680 COL2A1P02458 1487 aaPredicted RBP9.75□□□□□ -0.85
NFIX-211ENST00000588680 HMGCRP04035 888 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 PTPRAP18433 802 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 FASTKD5Q7L8L6 764 aaKnown RBP9.75□□□□□ -0.85
NFIX-211ENST00000588680 WWC1Q8IX03 1113 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 ANKRD13CQ8N6S4 541 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 ANKLE1Q8NAG6 615 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 COA7Q96BR5 231 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 UBE2OQ9C0C9 1292 aaKnown RBP9.75□□□□□ -0.85
NFIX-211ENST00000588680 PICK1Q9NRD5 415 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 FAM198AQ9UFP1 575 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 SLC45A1Q9Y2W3 748 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 ZHX2Q9Y6X8 837 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 IL16Q14005 1332 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 RPTORQ8N122 1335 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 RFX7Q2KHR2 1363 aa9.75□□□□□ -0.85
NFIX-211ENST00000588680 TRIM75PA6NK02 468 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 PHF20L1A8MW92 1017 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 CCDC27Q2M243 656 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 ZFPM1Q8IX07 1006 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 PRKRIP1Q9H875 184 aaPredicted RBP9.74□□□□□ -0.85
NFIX-211ENST00000588680 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.74□□□□□ -0.85
NFIX-211ENST00000588680 AFG3L2Q9Y4W6 797 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 CDH23Q9H251 3354 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 PFASO15067 1338 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 KIF16BQ96L93 1317 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 MYO9BQ13459 2157 aa9.74□□□□□ -0.85
NFIX-211ENST00000588680 VAMP4O75379 141 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 ALDH1L1O75891 902 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 PDE8BO95263 885 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 PRDX5P30044 214 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 TRIM32Q13049 653 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 PUM3Q15397 648 aaKnown RBP9.73□□□□□ -0.85
NFIX-211ENST00000588680 FAM110CQ1W6H9 321 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 TREML2Q5T2D2 321 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 SLC4A10Q6U841 1118 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 CCDC84Q86UT8 332 aaPredicted RBP9.73□□□□□ -0.85
NFIX-211ENST00000588680 ANKRD44Q8N8A2 993 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 KLHDC4Q8TBB5 520 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 GUCD1Q96NT3 240 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
NFIX-211ENST00000588680 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
NFIX-211ENST00000588680 IFIT1P09914 478 aaKnown RBP9.72□□□□□ -0.85
NFIX-211ENST00000588680 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
NFIX-211ENST00000588680 SLURP2P0DP57 97 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 FGFR2P21802 821 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 ZEB1P37275 1124 aaPredicted RBP9.72□□□□□ -0.85
NFIX-211ENST00000588680 RGS3P49796 1198 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 RABL6Q3YEC7 729 aaPredicted RBP9.72□□□□□ -0.85
NFIX-211ENST00000588680 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 HMX1Q9NP08 348 aaPredicted RBP9.72□□□□□ -0.85
NFIX-211ENST00000588680 USP40Q9NVE5 1235 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
NFIX-211ENST00000588680 CDK5RAP2Q96SN8 1893 aa9.71□□□□□ -0.85
NFIX-211ENST00000588680 EXOSC9Q06265 439 aaKnown RBP9.71□□□□□ -0.86
NFIX-211ENST00000588680 SH3BP5LQ7L8J4 393 aa9.71□□□□□ -0.86
NFIX-211ENST00000588680 ZSCAN29Q8IWY8 852 aaPredicted RBP9.71□□□□□ -0.86
NFIX-211ENST00000588680 TRIB2Q92519 343 aa9.71□□□□□ -0.86
NFIX-211ENST00000588680 FAM161BQ96MY7 647 aa9.71□□□□□ -0.86
NFIX-211ENST00000588680 OGDHLQ9ULD0 1010 aa9.71□□□□□ -0.86
NFIX-211ENST00000588680 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
NFIX-211ENST00000588680 UTYO14607 1347 aa9.71□□□□□ -0.86
NFIX-211ENST00000588680 BDP1A6H8Y1 2624 aa9.7□□□□□ -0.86
NFIX-211ENST00000588680 RLFQ13129 1914 aa9.7□□□□□ -0.86
NFIX-211ENST00000588680 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
NFIX-211ENST00000588680 LDHBP07195 334 aaKnown RBP9.7□□□□□ -0.86
NFIX-211ENST00000588680 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
NFIX-211ENST00000588680 SLC5A1P13866 664 aa9.7□□□□□ -0.86
NFIX-211ENST00000588680 MDM2Q00987 491 aaPredicted RBP9.7□□□□□ -0.86
NFIX-211ENST00000588680 MUC3AQ02505 3323 aa9.7□□□□□ -0.86
NFIX-211ENST00000588680 DDTLA6NHG4 134 aaPredicted RBP9.69□□□□□ -0.86
NFIX-211ENST00000588680 ENTPD3O75355 529 aa9.69□□□□□ -0.86
NFIX-211ENST00000588680 LRRC26Q2I0M4 334 aa9.69□□□□□ -0.86
NFIX-211ENST00000588680 FOCADQ5VW36 1801 aa9.69□□□□□ -0.86
NFIX-211ENST00000588680 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
NFIX-211ENST00000588680 IDI2Q9BXS1 227 aa9.69□□□□□ -0.86
NFIX-211ENST00000588680 DDX4Q9NQI0 724 aaKnown RBP9.69□□□□□ -0.86
NFIX-211ENST00000588680 GJD2Q9UKL4 321 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms