RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CCL5P13501 91 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 PTPRAP18433 802 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 PA2G4Q9UQ80 394 aaKnown RBP17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 AFG3L2Q9Y4W6 797 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 COL6A3P12111 3177 aa17.23■□□□□ 0.35
CLPTM1-208ENST00000588274 PDS5AQ29RF7 1337 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 ENTPD3O75355 529 aa17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 RAET1EQ8TD07 263 aa17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
CLPTM1-208ENST00000588274 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 FMNL1O95466 1100 aaPredicted RBP17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 FAM163AQ96GL9 167 aaPredicted RBP17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
CLPTM1-208ENST00000588274 ALPK3Q96L96 1907 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 SIPA1L1O43166 1804 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 FCGRTP55899 365 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 RHBDL3P58872 404 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 SLAIN1Q8ND83 568 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 CEP126Q9P2H0 1117 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
CLPTM1-208ENST00000588274 COL2A1P02458 1487 aaPredicted RBP17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 HOXD10P28358 340 aa17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 U2AF1L4Q8WU68 220 aaKnown RBP17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 RNF208Q9H0X6 261 aa17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 SMC4Q9NTJ3 1288 aa17.19■□□□□ 0.34
CLPTM1-208ENST00000588274 MEIS3Q99687 375 aa17.18■□□□□ 0.34
CLPTM1-208ENST00000588274 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
CLPTM1-208ENST00000588274 MROH7-TTC4A0A0A0MT08 1334 aa17.18■□□□□ 0.34
CLPTM1-208ENST00000588274 ELNP15502 786 aa17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 BTDP43251 543 aa17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 FLT3LGP49771 235 aa17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 IRF5Q13568 498 aa17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 PAK6Q9NQU5 681 aaPredicted RBP17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 ATAD5Q96QE3 1844 aa17.17■□□□□ 0.34
CLPTM1-208ENST00000588274 GPR75-ASB3A0A0A6YYF3 556 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 ZBTB7BO15156 539 aaPredicted RBP17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 FARP2O94887 1054 aaPredicted RBP17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 INHAP05111 366 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 TIMM10P62072 90 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 TREML2Q5T2D2 321 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 PXYLP1Q8TE99 480 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 AGTPBP1Q9UPW5 1226 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 PLXNB2O15031 1838 aa17.16■□□□□ 0.34
CLPTM1-208ENST00000588274 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 ADCY3O60266 1144 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 TBC1D12O60347 775 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 NPM3O75607 178 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 SGPL1O95470 568 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 UBXN2AP68543 259 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 MECOMQ03112 1051 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 MTX1Q13505 466 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 RRP1BQ14684 758 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 DPF3Q92784 378 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 CRISPLD2Q9H0B8 497 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 PICK1Q9NRD5 415 aa17.15■□□□□ 0.34
CLPTM1-208ENST00000588274 DOCK3Q8IZD9 2030 aa17.14■□□□□ 0.34
CLPTM1-208ENST00000588274 PICALMQ13492 652 aa17.14■□□□□ 0.33
CLPTM1-208ENST00000588274 HTATIP2Q9BUP3 242 aa17.14■□□□□ 0.33
CLPTM1-208ENST00000588274 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
CLPTM1-208ENST00000588274 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
CLPTM1-208ENST00000588274 TNPO2O14787 897 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-208ENST00000588274 TFCP2Q12800 502 aa17.13■□□□□ 0.33
CLPTM1-208ENST00000588274 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
CLPTM1-208ENST00000588274 XAGE2Q96GT9 111 aa17.13■□□□□ 0.33
CLPTM1-208ENST00000588274 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
CLPTM1-208ENST00000588274 SOX1O00570 391 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-208ENST00000588274 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-208ENST00000588274 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
CLPTM1-208ENST00000588274 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
CLPTM1-208ENST00000588274 BIN2Q9UBW5 565 aaPredicted RBP17.12■□□□□ 0.33
CLPTM1-208ENST00000588274 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1-208ENST00000588274 PROCA1Q8NCQ7 364 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms