RNA–Protein interactions for RNA: ENST00000588077.5

CACNA2D4-223, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA2D4, Length 3,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-223	ENST00000588077	USP44	Q9H0E7	712 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PRDM16	Q9HAZ2	1276 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	KDM3B	Q7LBC6	1761 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	EIF5	P55010	431 aa	Known RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PDIA6	Q15084	440 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	DPCR1	Q3MIW9	517 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	WWC2	Q6AWC2	1192 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FLAD1	Q8NFF5	587 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FUT8	Q9BYC5	575 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PARD6B	Q9BYG5	372 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SRP68	Q9UHB9	627 aa	Known RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PARP3	Q9Y6F1	533 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077		H3BQV1	296 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SRGAP3	O43295	1099 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	UBTFL1	P0CB47	393 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ZKSCAN1	P17029	563 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	C11orf91	Q3C1V1	193 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	IFFO2	Q5TF58	517 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ANKRD13D	Q6ZTN6	518 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CEP57L1	Q8IYX8	460 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	AKT1S1	Q96B36	256 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	UTP14A	Q9BVJ6	771 aa	Known RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	IRAK4	Q9NWZ3	460 aa		10.87	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PHACTR2	O75167	634 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	LMOD1	P29536	600 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CORO7	P57737	925 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	GUCY1B3	Q02153	619 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	REST	Q13127	1097 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	EXOC4	Q96A65	974 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	LRRC2	Q9BYS8	371 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SIL1	Q9H173	461 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SUGCT	Q9HAC7	445 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PDE11A	Q9HCR9	933 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ARFGAP3	Q9NP61	516 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	COL15A1	P39059	1388 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PI4KAP2	A4QPH2	592 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	KIN	O60870	393 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	HMGB1	P09429	215 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NECTIN1	Q15223	517 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CCDC158	Q5M9N0	1113 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	USPL1	Q5W0Q7	1092 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	AMIGO3	Q86WK7	504 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PI4KAP1	Q8N8J0	262 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	WDR24	Q96S15	920 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PAIP2	Q9BPZ3	127 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ANO10	Q9NW15	660 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TNS1	Q9HBL0	1735 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ATP1A3	P13637	1013 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	USP8	P40818	1118 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TOB2	Q14106	344 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MSL1	Q68DK7	614 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	COL23A1	Q86Y22	540 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	IQUB	Q8NA54	791 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NBPF3	Q9H094	633 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NUCKS1	Q9H1E3	243 aa	Known RBP	10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PXDNL	A1KZ92	1463 aa		10.86	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	EFCAB8	A8MWE9	144 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CAND2	O75155	1236 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NEXN	Q0ZGT2	675 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	BLOC1S2	Q6QNY1	142 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	GBP6	Q6ZN66	633 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CCDC73	Q6ZRK6	1079 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FSIP1	Q8NA03	581 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ZNF652	Q9Y2D9	606 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SLC27A2	O14975	620 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	IPO7	O95373	1038 aa	Known RBP	10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	GPT	P24298	496 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	LONRF2	Q1L5Z9	754 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	KCND1	Q9NSA2	647 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MAP3K2	Q9Y2U5	619 aa		10.85	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	AOX1	Q06278	1338 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077		A0A1B0GVL5	298 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	EPB41L2	O43491	1005 aa	Known RBP	10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CAVIN2	O95810	425 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	HSP90AA4P	Q58FG1	418 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	USP28	Q96RU2	1077 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SDF4	Q9BRK5	362 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PAPPA	Q13219	1627 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ME1	P48163	572 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	EFCAB13	Q8IY85	973 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	CCDC150	Q8NCX0	1101 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MIEF2	Q96C03	454 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	ATP5J2-PTCD1	G3V325	749 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	GNG11	P61952	73 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PPP2R3A	Q06190	1150 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	JAKMIP3	Q5VZ66	844 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	KSR2	Q6VAB6	950 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TADA2B	Q86TJ2	420 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	PLBD2	Q8NHP8	589 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	SSH3	Q8TE77	659 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	DPF2	Q92785	391 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MYD88	Q99836	296 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	TM6SF1	Q9BZW5	370 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	NARF	Q9UHQ1	456 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	FAN1	Q9Y2M0	1017 aa		10.84	□□□□□ -0.67
CACNA2D4-223	ENST00000588077	MAP3K15	Q6ZN16	1313 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms